Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08-
07] 3,610 sequences; 36,184,363 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq443 86.0 4e-12
>seq443
Length=6205
Score = 86.0 bits (94), Expect = 4e-12
Identities = 103/137 (75%), Gaps = 6/137 (4%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| || ||| |||| ||| || || || || || ||||| ||||| || |||||
Sbjct 3007 GACAAGGAGGGTATTCCACCGGACCAACAGCGATTGATCTTTGCTGGAAAGCAGTTGGAG 2948
Query 27943 GACGAACGCAG--CT-TGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999
|| | |||| || | || ||||||||||| || || |||||||||||||| |||||
Sbjct 2947 GATG---GCAGAACTCTTTCTGATTACAACATTCAGAAGGAGAGCACTTTGCACTTGGTG 2891
Query 28000 TTGCGTTTGCGTGGCGG 28016
| ||| | ||||||||
Sbjct 2890 CTTCGTCTTCGTGGCGG 2874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355846743166470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |