Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242955.1_202017-08- 07] 3,610 sequences; 36,184,363 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq443 86.0 4e-12 >seq443 Length=6205 Score = 86.0 bits (94), Expect = 4e-12 Identities = 103/137 (75%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| || || || || || ||||| ||||| || ||||| Sbjct 3007 GACAAGGAGGGTATTCCACCGGACCAACAGCGATTGATCTTTGCTGGAAAGCAGTTGGAG 2948 Query 27943 GACGAACGCAG--CT-TGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 || | |||| || | || ||||||||||| || || |||||||||||||| ||||| Sbjct 2947 GATG---GCAGAACTCTTTCTGATTACAACATTCAGAAGGAGAGCACTTTGCACTTGGTG 2891 Query 28000 TTGCGTTTGCGTGGCGG 28016 | ||| | |||||||| Sbjct 2890 CTTCGTCTTCGTGGCGG 2874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355846743166470