Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242965.1_202017-08-
07] 3,606 sequences; 37,244,066 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq562 104 2e-17
>seq562
Length=17028
Score = 104 bits (114), Expect = 2e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 5597 TGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACC 5656
||||| | || |||||| ||| ||||||||||| ||| ||| ||| ||||||| |
Sbjct 7293 TGCGCAACACGATCGCCCTCCTTCACCTCGAAATCAGTGTCTCCGTGGTTAAACAGCAGC 7352
Query 5657 ACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGC 5716
|| || | || || || || || || ||||||||||||||| |||||| | |||
Sbjct 7353 ACCTTTACTTGACCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCATGTGT 7412
Query 5717 TTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||| || ||||||||||||||||| | ||| ||||
Sbjct 7413 TTGGATGCTAGGCCGGAGCGGGGAGCTATGCGTCCGT 7449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430035499915472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |