Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242965.1_202017-08-
07] 3,606 sequences; 37,244,066 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3071 127 5e-24
>seq3071
Length=13184
Score = 127 bits (140), Expect = 5e-24
Identities = 181/252 (72%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562
|||||||||| || ||||| | |||| | |||||| | ||| ||| |||| || |
Sbjct 5625 TCATCACAGAGGCTGTTGAGATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 5566
Query 243563 TTATTGGCATGAACTCTGAACTC-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| ||||||||||| | ||||| ||| || |||||||| ||||| ||||| || |
Sbjct 5565 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTCGCCGATCGTCTC 5507
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| |||||| | ||||| |||||||| || ||||| || | ||| ||||||
Sbjct 5506 CTAGTCGCTCTTGGTAACGAGAAGGTGTACAAGTCTGCCAACCCATTCGACTTCATGGAG 5447
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| || || ||| || || ||||||||||| ||| | || |||| || ||
Sbjct 5446 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 5387
Query 243742 CCTGGTGTGATG 243753
||||||| |||
Sbjct 5386 GCTGGTGTTATG 5375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102829044876100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |