Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242965.1_202017-08-
07] 3,606 sequences; 37,244,066 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3543 105 8e-18
>seq3543
Length=23122
Score = 105 bits (116), Expect = 8e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241
||||||||| || || || || || ||||| || ||||||||||||||||||||||| ||
Sbjct 19372 TACACCAATTGGTCCAACACCTGGTCCTCCGCCACCATGTGGAATACAGAATGTCTTGTG 19431
Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301
| || |||||||| ||||| |||||| |||| || | || | || ||
Sbjct 19432 AAGGTTGAGATGACAGACATCAGCACCAATCTCACCAGGCGAACACAACCCAATTTGAGC 19491
Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361
||| | ||| ||||| || | || || ||||| || | | |||||| || | ||| |
Sbjct 19492 ATTCATATTGGCACCGTCCATGTAGACTTGACCGCCGTGCTGATGAACAATATCACA-AG 19550
Query 138362 CTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| | | | || | || || |||||||| || ||| ||||||||||||||
Sbjct 19551 CAGCCTTAATCTCTGGCTCGAATACACCGAATGTACTTGGGTATGTAATCATAAT 19605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578972301647120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |