Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242965.1_202017-08- 07] 3,606 sequences; 37,244,066 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq779 138 9e-28 >seq779 Length=13020 Score = 138 bits (152), Expect = 9e-28 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| ||||| |||||||||||||| ||||| || || | ||||||| | Sbjct 2709 CGGAGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCGCTCAGGGTGCGACCA 2650 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||||||||| ||||| | ||||| | ||| |||||||| ||||||||||| ||| Sbjct 2649 TCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGTTGATCCGGAGGAATACCCTCCTTG 2590 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | ||||| || || || |||||||| || Sbjct 2589 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATG 2530 Query 29752 GTTTTGCCAGT 29762 || |||||||| Sbjct 2529 GTCTTGCCAGT 2519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385202270338446