Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242985.1_202017-08- 07] 4,789 sequences; 36,003,868 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1045 100 3e-16 >seq1045 Length=34502 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 5345 TCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTG 5404 || |||| ||| ||||| || || ||| |||| ||||||||||| |||| || | Sbjct 34049 TCGCCCTCCTTCACCTCGAAATCAGTGTCTCCGTGGTTAAACAGCAGCACCTTTACTTGA 34108 Query 5405 CCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGG 5464 || || || || | ||||| ||||| |||||| |||||| | ||||||| || ||| Sbjct 34109 CCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCATGTGTTTGGATGCTAGG 34168 Query 5465 CCGGAACGTGGTGCTATGCGTCCGT 5489 ||||| || || ||||||||||||| Sbjct 34169 CCGGAGCGGGGAGCTATGCGTCCGT 34193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447723596541680