Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242985.1_202017-08-
07] 4,789 sequences; 36,003,868 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq576 93.3 4e-14
>seq576
Length=13942
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074
||||| || | || || | || |||||| | |||||||||||| | |||||
Sbjct 11423 ACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGACACCATCGACAATGTCAAGTCC 11364
Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134
||||| ||||| || || || ||||| |||||||| | |||| | || || ||
Sbjct 11363 AAGATCCAGGACAAGGAGGGTATTCCTCCGGATCAACAACGTTTGATCTTCGCTGGTAAA 11304
Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194
||||||||||||| | | | | ||||| || ||||| ||||||||||| || ||||
Sbjct 11303 CAACTCGAAGATGGTCGCACCCTGAGCGACTACAACATCCAAAAAGAATCCACCCTTCAC 11244
Query 24195 TTAGTG 24200
|| |||
Sbjct 11243 TTGGTG 11238
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| |||||| ||| ||| |||||||| | || || |||||| ||
Sbjct 11691 ATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTAAAGAGCAAGATTCAGGAT 11632
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || || || || || || |||||| | |||| | || ||||| ||||| ||||||
Sbjct 11631 AAGGAGGGAATTCCCCCGGACCAACAGCGCTTGATCTTCGCAGGCAAACAACTTGAAGAT 11572
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
| | | | | | ||||| || ||||||||||| || |||||
Sbjct 11571 GGCCGTACCTTGAGCGACTACAACATTCAAAAGGAGTCTAC 11531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429910906382295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |