Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242985.1_202017-08-
07] 4,789 sequences; 36,003,868 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq576 107 2e-18
>seq576
Length=13942
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||||||| ||||||||||| || ||||| ||| | || | |||| ||
Sbjct 11239 ACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCG 11298
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||| ||||| || || |||||||| |||||||| || ||||| || || || || ||
Sbjct 11299 AGTTGTTTACCAGCGAAGATCAAACGTTGTTGATCCGGAGGAATACCCTCCTTGTCCTGG 11358
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | ||||| |||| || || |||||||||| || |||
Sbjct 11359 ATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTG 11418
Query 101441 CCGGTTAAAGTTTTTAC 101457
|| || | ||| || ||
Sbjct 11419 CCAGTGAGAGTCTTGAC 11435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396255270839673
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |