Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242985.1_202017-08- 07] 4,789 sequences; 36,003,868 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq967 159 4e-34 seq187 154 2e-32 seq3189 150 2e-31 seq1585 140 3e-28 seq2289 134 1e-26 seq3352 118 1e-21 seq3240 118 1e-21 seq4277 111 2e-19 seq941 109 6e-19 seq1832 86.0 7e-12 >seq967 Length=3566 Score = 159 bits (176), Expect = 4e-34 Identities = 106/118 (90%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||| |||||||||||||| ||||||| ||||||| | ||||| ||||||||| Sbjct 122 TCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGATCTCAGTTCACTTCAACCTCCG 63 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC 8461 ||||| || ||||||| |||||||||||| ||||||| |||||||||||| ||||||| Sbjct 62 CCTCCTGGCTTCAAGCAATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGACTACAGGC 5 >seq187 Length=11015 Score = 154 bits (170), Expect = 2e-32 Identities = 122/145 (84%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||| Sbjct 10869 TCTCTCTCTGTTGCC-AGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTACAACCTCTA 10927 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 |||||| | ||||||| |||||||||||| ||||||| |||| |||||| |||||| Sbjct 10928 CCTCCCAGATTCAAGCAATTCTCCTGCCTTAGCCTCCCAAGTATCTGGGACTACAGGTGT 10987 Query 8464 AAGCCACCACGCCAAGCTAATTTTT 8488 | ||||||| ||| ||||||||||| Sbjct 10988 ATGCCACCATGCCCAGCTAATTTTT 11012 >seq3189 Length=4266 Score = 150 bits (166), Expect = 2e-31 Identities = 120/143 (84%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 8362 GCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTA 8421 ||||||||| |||||| |||| |||||| |||||||| | |||| |||||||||| | Sbjct 145 GCTGGAGTGAAGTGGCGCCATCTTGGCTCACCGCAACCTCTGACTCCTGGGTTCAAGCGA 86 Query 8422 TTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCT 8481 ||||||||||||||||||| |||||||||||| |||||| ||||||| || ||| Sbjct 85 TTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATCACAGGCGTGTGCCACCA-ACCCGGCT 27 Query 8482 AATTTTTGTATTTTTAGTAGAGA 8504 |||| |||||||||||||||||| Sbjct 26 AATTCTTGTATTTTTAGTAGAGA 4 >seq1585 Length=6104 Score = 140 bits (154), Expect = 3e-28 Identities = 97/110 (88%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 5995 TCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCGCTATCTCAGCTCACTGCAAACTCCG 6054 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGA 8453 |||||| |||||| || ||||||||||||||| |||| |||||||||||| Sbjct 6055 CCTCCCAGGTTCACGCCATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGA 6104 >seq2289 Length=741 Score = 134 bits (148), Expect = 1e-26 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 8357 CCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCA 8416 ||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct 740 CCCAGACTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCG 681 Query 8417 AGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCAC 8473 | |||||||||||||||| |||| ||||||||| | |||||||| |||||||| Sbjct 680 AATGATTCTCCTGCCTCAGCTTCCAAAGTAGCTGGAACTACAGGCATGTGCCACCAC 624 >seq3352 Length=4468 Score = 118 bits (130), Expect = 1e-21 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||||||||||| ||| ||| |||||| |||| ||| |||||||||| | |||||| Sbjct 156 TTTTTGTATTTTTTGTATAGATGGGGTTTTTCCATTTTGTCCAGGCTGGTTTTTAACTCC 97 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACA 8593 || |||||||| |||| || |||| |||||||||||||||||| ||||| Sbjct 96 TGGCCTCATGTTATCCCCCCGCCTTTGCCTCCCAAAGTGCTGGGGTTACA 47 >seq3240 Length=2049 Score = 118 bits (130), Expect = 1e-21 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||||||||||| ||| ||| |||||| |||| ||| |||||||||| | |||||| Sbjct 1894 TTTTTGTATTTTTTGTATAGATGGGGTTTTTCCATTTTGTCCAGGCTGGTTTTTAACTCC 1953 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACA 8593 || |||||||| |||| || |||| |||||||||||||||||| ||||| Sbjct 1954 TGGCCTCATGTTATCCCCCCGCCTTTGCCTCCCAAAGTGCTGGGGTTACA 2003 >seq4277 Length=765 Score = 111 bits (122), Expect = 2e-19 Identities = 86/101 (85%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||||||| | ||| ||||||||| | ||||| | |||||||||||||| | ||| Sbjct 666 CTCTGTTGCC-ATGCTAGAGTGCAGTAGTGCGATCTTGGGTCACTGCAACCTCCACTTCC 724 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCT 8449 ||||||||||| |||||||| ||||||||||| |||||||| Sbjct 725 CGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCGAGTAGCT 765 >seq941 Length=12164 Score = 109 bits (120), Expect = 6e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 || |||||||||||| ||||||||||| ||||||| ||||| ||||| |||| ||||| Sbjct 110 CTTTGTTGCCCAGGCGGGAGTGCAGTGTGGTGATCTCGGCTCAATGCAATCTCCCCCTCC 51 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA 8458 | |||| |||| || |||||| || || || |||||||||||| |||| Sbjct 50 CAGGTTAAAGCGGTTTTCCTGCTCCAACCCCCTGAGTAGCTGGGACTACA 1 >seq1832 Length=1492 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 8346 TCACTCT-GTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGC 8404 ||||||| ||||||||||||||||| || |||| |||||| |||||| |||||||| || Sbjct 1419 TCACTCTTGTTGCCCAGGCTGGAGTACAATGGCGCGATCTCAGCTCACCGCAACCTCTGC 1478 Query 8405 CTCCCGGGTTCAAG 8418 ||||| | |||||| Sbjct 1479 CTCCCAGATTCAAG 1492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521456782424600