Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08- 07] 4,289 sequences; 35,887,177 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq82 159 7e-34 >seq82 Length=17769 Score = 159 bits (176), Expect = 7e-34 Identities = 188/252 (75%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 |||| ||||| || ||||| | |||| | || ||| | || ||| |||| ||| | Sbjct 7205 TCATCACAGAGGCTGTTGAGATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 7264 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||||||||||| |||||| ||| || |||||||| ||||| ||||| || || Sbjct 7265 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTTGCCGATCGTCTT 7323 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || |||||| ||||||| |||||||| ||| ||||| || | || |||||| Sbjct 7324 CTAGTCGCTCTTGGTAACGAGAAGGTGTACAAGTCTGCCAACCCATTCGACTTCATGGAG 7383 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || ||| ||||| ||||||||||| ||| | || ||||||| |||| | Sbjct 7384 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 7443 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 7444 GCTGGTGTTATG 7455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057765869596070