Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08- 07] 4,289 sequences; 35,887,177 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq82 87.8 2e-12 >seq82 Length=17769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||||||||| || ||| |||||||||| ||||||||||| || || Sbjct 6830 ATGTATGTATCGATGAGGAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATAATTTGG 6771 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | ||||||||||| | ||| || || | || Sbjct 6770 AAACCGTAGAAGCAACGAGCCTCGGGGATTTGAACTTCACCACTGAAGCGCTCGACAAGG 6711 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||||| || || |||||| || ||||| || || Sbjct 6710 TTCTCGTTGACTATTCCGTCGGATGCTGCGAAGAATGC 6673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517517853086520