Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08-
07] 4,289 sequences; 35,887,177 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq3966 100 3e-16
>seq3966
Length=37748
Score = 100 bits (110), Expect = 3e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 5345 TCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTG 5404
|| |||| ||| ||||| || || ||| |||| ||||||||||| |||| || |
Sbjct 604 TCGCCCTCCTTCACCTCGAAATCAGTGTCTCCGTGGTTAAACAGCAGCACCTTTACTTGA 545
Query 5405 CCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGG 5464
|| || || || | ||||| ||||| |||||| |||||| | ||||||| || |||
Sbjct 544 CCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCATGTGTTTGGATGCTAGG 485
Query 5465 CCGGAACGTGGTGCTATGCGTCCGT 5489
||||| || || |||||||||||||
Sbjct 484 CCGGAGCGGGGAGCTATGCGTCCGT 460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447726394981680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |