Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08- 07] 4,289 sequences; 35,887,177 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq3966 104 2e-17 >seq3966 Length=37748 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 5597 TGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACC 5656 ||||| | || |||||| ||| ||||||||||| ||| ||| ||| ||||||| | Sbjct 616 TGCGCAACACGATCGCCCTCCTTCACCTCGAAATCAGTGTCTCCGTGGTTAAACAGCAGC 557 Query 5657 ACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGC 5716 || || | || || || || || || ||||||||||||||| |||||| | ||| Sbjct 556 ACCTTTACTTGACCCCGATAATCCGCATCGATCACGCCCGCGCCCGTGTCGATCATGTGT 497 Query 5717 TTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||| || ||||||||||||||||| | ||| |||| Sbjct 496 TTGGATGCTAGGCCGGAGCGGGGAGCTATGCGTCCGT 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430031920115768