Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08-
07] 4,289 sequences; 35,887,177 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq82 132 1e-25
>seq82
Length=17769
Score = 132 bits (146), Expect = 1e-25
Identities = 182/252 (72%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562
|||||||||| || ||||| | |||| | |||||| | ||| ||| |||| || |
Sbjct 7205 TCATCACAGAGGCTGTTGAGATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGTGCAC 7264
Query 243563 TTATTGGCATGAACTCTGAAC-TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| ||||||||||| | |||| | ||| || |||||||| ||||| ||||| || ||
Sbjct 7265 TTCTTGGCATGAACGC-GAACTTGATGAAGCAATACATCGAGTTCGTTGCCGATCGTCTT 7323
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| |||| |||||| | ||||| |||||||| || ||||| || | ||| ||||||
Sbjct 7324 CTAGTCGCTCTTGGTAACGAGAAGGTGTACAAGTCTGCCAACCCATTCGACTTCATGGAG 7383
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| || || ||| || || ||||||||||| ||| | || |||| || ||
Sbjct 7384 AACATCTCCCTAGCAGGCAAGACAAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 7443
Query 243742 CCTGGTGTGATG 243753
||||||| |||
Sbjct 7444 GCTGGTGTTATG 7455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102819393642150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |