Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08-
07] 4,289 sequences; 35,887,177 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq473 206 2e-47
seq1181 86.0 5e-11
>seq473
Length=38710
Score = 206 bits (228), Expect = 2e-47
Identities = 896/1401 (64%), Gaps = 17/1401 (1%)
Strand=Plus/Plus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| ||||| | ||||| |||||||| | ||| || ||||| || ||||| || ||
Sbjct 971 GCAGAGACATTCATGATACCGTTGGCATCAATATCGAAGGTGACCTCGATTTGTGGAACA 1030
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|| | |||||||||| || || | | || |||| ||| || || || ||
Sbjct 1031 CCACGAGGAGCAGGTGGAATACCAGTGAGTTCGAACTTTCCGAGAAGGTTGTTGTCCTTT 1090
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
||| ||| ||||||||||| | ||| || || ||| ||| ||||| || |
Sbjct 1091 GTGCGCGTTCTCTCACCCTCGAAGACTTGAATCAAGACACCAGGTTGGTTATCGGAGAAG 1150
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498
|| | || ||| || || || ||||| || ||||| | | ||| | ||||||
Sbjct 1151 GTAGAGAAGACTTCAGACTTCTTGGTGGGAATGGTGGTGTTGCGGTGAATGAGCTTGGTC 1210
Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558
|| ||||| || || || | ||||||||| | || | |||||| | || | ||
Sbjct 1211 ATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGCGCGACATCGAGAAGAAGGATC 1270
Query 517559 T--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615
| || | || || || | || | |||| || ||||| || || | ||||| ||
Sbjct 1271 TCGTTGGTAGACTTGGATGAAGTGTCACCAGAGAGGATAGCAGCCTGGACGGCAGCGCCG 1330
Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675
||||||||||| |||||||| || | | | ||| | | ||||| ||||| | |
Sbjct 1331 TATGCAACAGCCTCATCAGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGTAGTCG 1390
Query 517676 GAAAGAAGTTGTCT---TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732
| | || | ||| ||| | || ||||| | || || || || || || || ||
Sbjct 1391 GTGATGAGCT-TCTGGATACGT--GGGATACGGGTGGAACCACCGACCAAGACGATCTCG 1447
Query 517733 TGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGAC 517790
|| || ||| ||||| || | || | || | || || || ||||| |
Sbjct 1448 TGGACTCTG-GATTTGTCGATCTTGGCGTCAGCGAGGACACGGTCGACTGGGTTGGTGGT 1506
Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850
| || || | |||| |||||||| ||||| ||| | ||| | || | |
Sbjct 1507 G-GATCGGAAGAGGTCTTGGCAAAGTTCCTCGAAACGAGCACGAGTGATAGAGGTGTAGA 1565
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
| || || || ||||| | ||| || | ||| || | || || | || || || || |
Sbjct 1566 AGTCGATACCCTCGAAGAGAGAGTCGATTTCGATGGATGTCTGGGCAGAGGAGGAGAGGG 1625
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTC 517969
||| ||||||||||| ||||| || | || | || | || || | | || ||
Sbjct 1626 TACGCTTAGCACGTTCGCATGCAGTGCGGAGACGACGAAGAGCACGAGCGTTAGTGCTT- 1684
Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029
|||||| | || | || | |||||| || | || | | || ||||| || ||
Sbjct 1685 AAATCTTTCTTGTGCTTGCGCTTGAACTCGTTTACGAAGTGGTTAACGAGACGGTTGTCG 1744
Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089
|| || ||||| ||||| | ||| | || | || | | |||| || | || ||
Sbjct 1745 AAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACTTCAAAGATACCCTCC 1804
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | ||| |||| ||||| |||||| ||||| | ||| || || || || ||
Sbjct 1805 TCAATGGTCAAGAGAGAAACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTT 1864
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
|| || || || || | ||| || |||| ||||| ||||| || || ||
Sbjct 1865 CGCTCACCCTCAACCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCAGTAGGCTCGTTG 1924
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|| || | | |||||| ||||| || || ||||||||||| |||||||| | |||
Sbjct 1925 ATGATACGGAGAACATTGAGACCGGCGATGAGACCTGCATCTTTTGTGGCTTGACGTTGG 1984
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
|| ||| | || ||||| |||||||| | || || | | || | ||| | ||
Sbjct 1985 GAGTCGGTGAAGTATGCTGGAACAGTGACGACAGCGTTGTTGACGGTTCCACCGAGGTAG 2044
Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389
|| || || | |||| || || | ||| || || |||| ||| || | ||
Sbjct 2045 GCCTCAGCAGTCTCCCTCATCTTGACCAAGACCATCGAGGAGATTTCTTCGGGTGTGAAT 2104
Query 518390 TGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448
||||| | || |||| | ||||||| ||| || ||| | || ||
Sbjct 2105 TGCTTAGCCTCGCCCTTGA-ACTCGACTTCAATGACTGGCTTTCCGCCACGGTCGATGAC 2163
Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 518508
|| ||||| ||| |||||||| | ||| || | |||| || | | ||| ||
Sbjct 2164 CTTGAATGGGAAGTGCTTCATATCAGCTTGGACTTCTGGGTCGGCGAATTTACGACCGAT 2223
Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568
| || || ||||| || | || || || || || || || |||| | || || ||
Sbjct 2224 CAGACGCTTAGCATCGAAGACTGTGTTTGTAGGGTTCATGGCGACTTGGTTCTTTGCGGC 2283
Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628
|||||| |||||| |||| || ||||| || | ||| | || |||||||| || || ||
Sbjct 2284 ATCTCCGATCAGACGTTCGGTGTCTGTGAAAGCAACGAACGAAGGAGTTGTTCGGTTTCC 2343
Query 518629 TTGATCATTCGCAATAATTTC 518649
||| || || || ||||||||
Sbjct 2344 TTGGTCGTTGGCGATAATTTC 2364
Score = 206 bits (228), Expect = 2e-47
Identities = 896/1401 (64%), Gaps = 17/1401 (1%)
Strand=Plus/Minus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| ||||| | ||||| |||||||| | ||| || ||||| || ||||| || ||
Sbjct 37740 GCAGAGACATTCATGATACCGTTGGCATCAATATCGAAGGTGACCTCGATTTGTGGAACA 37681
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|| | |||||||||| || || | | || |||| ||| || || || ||
Sbjct 37680 CCACGAGGAGCAGGTGGAATACCAGTGAGTTCGAACTTTCCGAGAAGGTTGTTGTCCTTT 37621
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
||| ||| ||||||||||| | ||| || || ||| ||| ||||| || |
Sbjct 37620 GTGCGCGTTCTCTCACCCTCGAAGACTTGAATCAAGACACCAGGTTGGTTATCGGAGAAG 37561
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498
|| | || ||| || || || ||||| || ||||| | | ||| | ||||||
Sbjct 37560 GTAGAGAAGACTTCAGACTTCTTGGTGGGAATGGTGGTGTTGCGGTGAATGAGCTTGGTC 37501
Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558
|| ||||| || || || | ||||||||| | || | |||||| | || | ||
Sbjct 37500 ATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGCGCGACATCGAGAAGAAGGATC 37441
Query 517559 T--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615
| || | || || || | || | |||| || ||||| || || | ||||| ||
Sbjct 37440 TCGTTGGTAGACTTGGATGAAGTGTCACCAGAGAGGATAGCAGCCTGGACGGCAGCGCCG 37381
Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675
||||||||||| |||||||| || | | | ||| | | ||||| ||||| | |
Sbjct 37380 TATGCAACAGCCTCATCAGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGTAGTCG 37321
Query 517676 GAAAGAAGTTGTCT---TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732
| | || | ||| ||| | || ||||| | || || || || || || || ||
Sbjct 37320 GTGATGAGCT-TCTGGATACGT--GGGATACGGGTGGAACCACCGACCAAGACGATCTCG 37264
Query 517733 TGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGAC 517790
|| || ||| ||||| || | || | || | || || || ||||| |
Sbjct 37263 TGGACTCTG-GATTTGTCGATCTTGGCGTCAGCGAGGACACGGTCGACTGGGTTGGTGGT 37205
Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850
| || || | |||| |||||||| ||||| ||| | ||| | || | |
Sbjct 37204 G-GATCGGAAGAGGTCTTGGCAAAGTTCCTCGAAACGAGCACGAGTGATAGAGGTGTAGA 37146
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
| || || || ||||| | ||| || | ||| || | || || | || || || || |
Sbjct 37145 AGTCGATACCCTCGAAGAGAGAGTCGATTTCGATGGATGTCTGGGCAGAGGAGGAGAGGG 37086
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTC 517969
||| ||||||||||| ||||| || | || | || | || || | | || ||
Sbjct 37085 TACGCTTAGCACGTTCGCATGCAGTGCGGAGACGACGAAGAGCACGAGCGTTAGTGCTT- 37027
Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029
|||||| | || | || | |||||| || | || | | || ||||| || ||
Sbjct 37026 AAATCTTTCTTGTGCTTGCGCTTGAACTCGTTTACGAAGTGGTTAACGAGACGGTTGTCG 36967
Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089
|| || ||||| ||||| | ||| | || | || | | |||| || | || ||
Sbjct 36966 AAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACTTCAAAGATACCCTCC 36907
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | ||| |||| ||||| |||||| ||||| | ||| || || || || ||
Sbjct 36906 TCAATGGTCAAGAGAGAAACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTT 36847
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
|| || || || || | ||| || |||| ||||| ||||| || || ||
Sbjct 36846 CGCTCACCCTCAACCTTCTTGTCCAAACCGTAAGCAATGGCAGCTGCAGTAGGCTCGTTG 36787
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|| || | | |||||| ||||| || || ||||||||||| |||||||| | |||
Sbjct 36786 ATGATACGGAGAACATTGAGACCGGCGATGAGACCTGCATCTTTTGTGGCTTGACGTTGG 36727
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
|| ||| | || ||||| |||||||| | || || | | || | ||| | ||
Sbjct 36726 GAGTCGGTGAAGTATGCTGGAACAGTGACGACAGCGTTGTTGACGGTTCCACCGAGGTAG 36667
Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389
|| || || | |||| || || | ||| || || |||| ||| || | ||
Sbjct 36666 GCCTCAGCAGTCTCCCTCATCTTGACCAAGACCATCGAGGAGATTTCTTCGGGTGTGAAT 36607
Query 518390 TGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448
||||| | || |||| | ||||||| ||| || ||| | || ||
Sbjct 36606 TGCTTAGCCTCGCCCTTGA-ACTCGACTTCAATGACTGGCTTTCCGCCACGGTCGATGAC 36548
Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 518508
|| ||||| ||| |||||||| | ||| || | |||| || | | ||| ||
Sbjct 36547 CTTGAATGGGAAGTGCTTCATATCAGCTTGGACTTCTGGGTCGGCGAATTTACGACCGAT 36488
Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568
| || || ||||| || | || || || || || || || |||| | || || ||
Sbjct 36487 CAGACGCTTAGCATCGAAGACTGTGTTTGTAGGGTTCATGGCGACTTGGTTCTTTGCGGC 36428
Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628
|||||| |||||| |||| || ||||| || | ||| | || |||||||| || || ||
Sbjct 36427 ATCTCCGATCAGACGTTCGGTGTCTGTGAAAGCAACGAACGAAGGAGTTGTTCGGTTTCC 36368
Query 518629 TTGATCATTCGCAATAATTTC 518649
||| || || || ||||||||
Sbjct 36367 TTGGTCGTTGGCGATAATTTC 36347
>seq1181
Length=31466
Score = 86.0 bits (94), Expect = 5e-11
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 671612 TCCAGAGGTTTTTGTCGA-AATTCTTTTATTGAGGGTCTTGGACCTTTTGAATTTTTCTT 671670
|| |||||||| || || ||||| | | || |||||| || |||||| |||||
Sbjct 14506 TCGAGAGGTTTC-GTTGAGAATTCATATCTTAGAGGTCTTACCCCCACTGAATTCTTCTT 14564
Query 671671 CCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACTGCTGATACTGG 671730
||| | ||||| |||||||||||| | || |||| || | || || || || |||||
Sbjct 14565 CCACGCCATGGCTGGTCGTGAAGGTTTGATCGATACTGCAGTCAAGACCGCAGAAACTGG 14624
Query 671731 TTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCAAACAAGAATATGATGGTAC 671790
||| |||||| | ||||| ||| || |||||| ||| ||||||| |||||
Sbjct 14625 TTACATTCAACGTCGTCTTGTCAAAGCTCTTGAAGATGTCATGGCGAAATATGACGGTAC 14684
Query 671791 AGTAAGAAA 671799
||| ||||
Sbjct 14685 AGTCCGAAA 14693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780609565692034
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