Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08-
07] 4,289 sequences; 35,887,177 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq3136 138 9e-28
>seq3136
Length=22676
Score = 138 bits (152), Expect = 9e-28
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| |||||||| ||||| |||||||||||||| ||||| || || | ||||||| |
Sbjct 19967 CGGAGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCGCTCAGGGTGCGACCA 20026
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||||||||| ||||| | ||||| | ||| |||||||| ||||||||||| |||
Sbjct 20027 TCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGTTGATCCGGAGGAATACCCTCCTTG 20086
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || |||||| | || | ||||| || || || |||||||| ||
Sbjct 20087 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATG 20146
Query 29752 GTTTTGCCAGT 29762
|| ||||||||
Sbjct 20147 GTCTTGCCAGT 20157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385199063749749
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |