Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08- 07] 4,289 sequences; 35,887,177 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq473 316 6e-81 seq3136 156 1e-32 seq34 149 2e-30 seq1181 136 1e-26 seq1378 120 9e-22 seq449 104 7e-17 seq429 87.8 5e-12 >seq473 Length=38710 Score = 316 bits (350), Expect = 6e-81 Identities = 954/1462 (65%), Gaps = 26/1462 (2%) Strand=Plus/Minus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || |||||||| |||||||| || || || || | | | | |||| | | Sbjct 2425 TATCGGTATCGATTTGGGTACTACCTACTCGTGCGTGGGCATCTTCCGTGATGACAGAAT 2366 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 ||||| || || || || ||||| ||| ||||||| || || | |||||| || || || Sbjct 2365 CGAAATTATCGCCAACGACCAAGGAAACCGAACAACTCCTTCGTTCGTTGCTTTCACAGA 2306 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || || ||| |||| || ||| | ||||| || |||| || || || | ||| || Sbjct 2305 CACCGAACGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCTACAAACAC 2246 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAAT 349436 || || ||||||||||| || || ||| | | || | ||| || || ||| Sbjct 2245 AGTCTTCGATGCTAAGCGTCTGATCGGTCGTAAATTCGCCGACCCAGAAGTC----CAAG 2190 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||||| | || || || || || | || | | | | | || || ||| | |||| Sbjct 2189 CTGATATGAAGCACTTCCCATTCAAGGTCAT--CGACCGTGGCGGA-AAGCCAGTCATTG 2133 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 | || || | || || || || ||||| |||||||||||| || || ||||| | Sbjct 2132 AAGTCGAGTTCAAGGGCGAGGCTAAGCAATTCACACCCGAAGAAATCTCCTCGATGGTCT 2073 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||| ||| | |||||| || || | |||| ||| || | | ||||| Sbjct 2072 TGGTCAAGATGAGGGAGACTGCTGAGGCCTACCTCGGTGGAACCGTCAACAACGCTGTCG 2013 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| ||||| || || | || |||| ||| || ||||||||||| || || Sbjct 2012 TCACTGTTCCAGCATACTTCACCGACTCCCAACGTCAAGCCACAAAAGATGCAGGTCTCA 1953 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | |||||||| | || || || || || ||||| || || ||||| || | Sbjct 1952 TCGCCGGTCTCAATGTTCTCCGTATCATCAACGAGCCTACTGCAGCTGCCATTGCTTACG 1893 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | || || | | ||| || ||| |||| || || ||| | ||||| || | Sbjct 1892 GTTTGGACAAGAAGGTTGAGGGTGAGCGAAACGTTCTCATCTTCGATCTTGGTGGAGGAA 1833 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || | || |||| ||||| || |||||||| || | || || | Sbjct 1832 CCTTCGATGTTTCTCTCTTGACCATTGAGGAGGGTATCTTTGAAGTCAAGTCCACCGCCG 1773 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || ||||||||| || || || || | Sbjct 1772 GTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTCGTAAACG 1713 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | | ||| || | || | ||||| || Sbjct 1712 AGTTCAAGCG-CAAGCACAAGAAAGATTTAAGCACTAACGCTCGTGCTCTTCGTCGTCTC 1654 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | ||||| || ||||||||||||||| || | || || || |||| || || || ||| Sbjct 1653 CGCACTGCATGCGAACGTGCTAAGCGTACCCTCTCCTCCTCTGCCCAGACATCCATCGAA 1594 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || | || |||| | ||||| || |||||||| || || Sbjct 1593 ATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCTATCACTCGTGCTCGTTTCGAG 1534 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 ||| | || || || || || | || | | || || || || | || Sbjct 1533 GAACTTTGCCAAGACCTCTTCCGATCCACCACCAACCCAGTCGACCGTGTCCTCGCTGAC 1474 Query 350156 GCAAAAATGTCCAAAAAT-CAGA-TTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 || || | || | |||| |||| | | || | || || || |||||||| || |||| Sbjct 1473 GCCAAGA--TCGACAAATCCAGAGTCCACGAGATCGTCTTGGTCGGTGGTTCCACCCGTA 1416 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA 350273 | ||| | || || | | | || | || || || || || || | || | Sbjct 1415 TCCCACGTATCCAGAAGCTCATCACCGACTACTTCAACGGTAAGGAGCCAAACAAGTCCA 1356 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| ||||||||||| || ||||| || ||||| |||| | ||||| Sbjct 1355 TCAACCCTGATGAGGCTGTTGCATACGGCGCTGCCGTCCAGGCTGCTATCCTCTCTGG-- 1298 Query 350334 ATAAGAGTTC-TAAAATT-----GATGATCTATTACTACTAGATGTAACTCCACTTTCGC 350387 | | | ||| | || | | || | | || || ||||| | ||| | || | Sbjct 1297 -TGACACTTCATCCAAGTCTACCAACGAGATCCTTCTTCTCGATGTCGCGCCATTGTCTC 1239 Query 350388 TTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTAC 350447 |||| | || ||| |||||| | |||||| || |||| | || | || | | Sbjct 1238 TTGGTATCGAGACTGCTGGTGGACAAATGACCAAGCTCATTCACCGCAACACCACCATTC 1179 Query 350448 CTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTC 350507 | || || ||||| || || ||||| || | ||||| || || | || |||| Sbjct 1178 CCACCAAGAAGTCTGAAGTCTTCTCTACCTTCTCCGATAACCAACCTGGTGTCTTGATTC 1119 Query 350508 AAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCC 350567 |||| || || ||||| | | ||||| || || || || || ||| | || | Sbjct 1118 AAGTCTTCGAGGGTGAGAGAACGCGCACAAAGGACAACAACCTTCTCGGAAAGTTCGAAC 1059 Query 350568 TAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTG 350627 | | || |||||||| ||| | || ||||| || || || ||| | |||||||||| Sbjct 1058 TCACTGGTATTCCACCTGCTCCTCGTGGTGTTCCACAAATCGAGGTCACCTTCGATATTG 999 Query 350628 ATTCAAATGGTATTTTAAATGT 350649 || | || ||||| | ||||| Sbjct 998 ATGCCAACGGTATCATGAATGT 977 Score = 316 bits (350), Expect = 6e-81 Identities = 954/1462 (65%), Gaps = 26/1462 (2%) Strand=Plus/Plus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || |||||||| |||||||| || || || || | | | | |||| | | Sbjct 36286 TATCGGTATCGATTTGGGTACTACCTACTCGTGCGTGGGCATCTTCCGTGATGACAGAAT 36345 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 ||||| || || || || ||||| ||| ||||||| || || | |||||| || || || Sbjct 36346 CGAAATTATCGCCAACGACCAAGGAAACCGAACAACTCCTTCGTTCGTTGCTTTCACAGA 36405 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || || ||| |||| || ||| | ||||| || |||| || || || | ||| || Sbjct 36406 CACCGAACGTCTGATCGGAGATGCCGCAAAGAACCAAGTCGCCATGAACCCTACAAACAC 36465 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAAT 349436 || || ||||||||||| || || ||| | | || | ||| || || ||| Sbjct 36466 AGTCTTCGATGCTAAGCGTCTGATCGGTCGTAAATTCGCCGACCCAGAAGTC----CAAG 36521 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||||| | || || || || || | || | | | | | || || ||| | |||| Sbjct 36522 CTGATATGAAGCACTTCCCATTCAAGGTCAT--CGACCGTGGCGGA-AAGCCAGTCATTG 36578 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 | || || | || || || || ||||| |||||||||||| || || ||||| | Sbjct 36579 AAGTCGAGTTCAAGGGCGAGGCTAAGCAATTCACACCCGAAGAAATCTCCTCGATGGTCT 36638 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||| ||| | |||||| || || | |||| ||| || | | ||||| Sbjct 36639 TGGTCAAGATGAGGGAGACTGCTGAGGCCTACCTCGGTGGAACCGTCAACAACGCTGTCG 36698 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| ||||| || || | || |||| ||| || ||||||||||| || || Sbjct 36699 TCACTGTTCCAGCATACTTCACCGACTCCCAACGTCAAGCCACAAAAGATGCAGGTCTCA 36758 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | |||||||| | || || || || || ||||| || || ||||| || | Sbjct 36759 TCGCCGGTCTCAATGTTCTCCGTATCATCAACGAGCCTACTGCAGCTGCCATTGCTTACG 36818 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | || || | | ||| || ||| |||| || || ||| | ||||| || | Sbjct 36819 GTTTGGACAAGAAGGTTGAGGGTGAGCGAAACGTTCTCATCTTCGATCTTGGTGGAGGAA 36878 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || | || |||| ||||| || |||||||| || | || || | Sbjct 36879 CCTTCGATGTTTCTCTCTTGACCATTGAGGAGGGTATCTTTGAAGTCAAGTCCACCGCCG 36938 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || ||||||||| || || || || | Sbjct 36939 GTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTTAACCACTTCGTAAACG 36998 Query 349917 AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| ||||| || | ||| | | ||| || | || | ||||| || Sbjct 36999 AGTTCAAGCG-CAAGCACAAGAAAGATTTAAGCACTAACGCTCGTGCTCTTCGTCGTCTC 37057 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | ||||| || ||||||||||||||| || | || || || |||| || || || ||| Sbjct 37058 CGCACTGCATGCGAACGTGCTAAGCGTACCCTCTCCTCCTCTGCCCAGACATCCATCGAA 37117 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || | || |||| | ||||| || |||||||| || || Sbjct 37118 ATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCTATCACTCGTGCTCGTTTCGAG 37177 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 ||| | || || || || || | || | | || || || || | || Sbjct 37178 GAACTTTGCCAAGACCTCTTCCGATCCACCACCAACCCAGTCGACCGTGTCCTCGCTGAC 37237 Query 350156 GCAAAAATGTCCAAAAAT-CAGA-TTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 || || | || | |||| |||| | | || | || || || |||||||| || |||| Sbjct 37238 GCCAAGA--TCGACAAATCCAGAGTCCACGAGATCGTCTTGGTCGGTGGTTCCACCCGTA 37295 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA 350273 | ||| | || || | | | || | || || || || || || | || | Sbjct 37296 TCCCACGTATCCAGAAGCTCATCACCGACTACTTCAACGGTAAGGAGCCAAACAAGTCCA 37355 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| ||||||||||| || ||||| || ||||| |||| | ||||| Sbjct 37356 TCAACCCTGATGAGGCTGTTGCATACGGCGCTGCCGTCCAGGCTGCTATCCTCTCTGG-- 37413 Query 350334 ATAAGAGTTC-TAAAATT-----GATGATCTATTACTACTAGATGTAACTCCACTTTCGC 350387 | | | ||| | || | | || | | || || ||||| | ||| | || | Sbjct 37414 -TGACACTTCATCCAAGTCTACCAACGAGATCCTTCTTCTCGATGTCGCGCCATTGTCTC 37472 Query 350388 TTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTAC 350447 |||| | || ||| |||||| | |||||| || |||| | || | || | | Sbjct 37473 TTGGTATCGAGACTGCTGGTGGACAAATGACCAAGCTCATTCACCGCAACACCACCATTC 37532 Query 350448 CTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTC 350507 | || || ||||| || || ||||| || | ||||| || || | || |||| Sbjct 37533 CCACCAAGAAGTCTGAAGTCTTCTCTACCTTCTCCGATAACCAACCTGGTGTCTTGATTC 37592 Query 350508 AAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCC 350567 |||| || || ||||| | | ||||| || || || || || ||| | || | Sbjct 37593 AAGTCTTCGAGGGTGAGAGAACGCGCACAAAGGACAACAACCTTCTCGGAAAGTTCGAAC 37652 Query 350568 TAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTG 350627 | | || |||||||| ||| | || ||||| || || || ||| | |||||||||| Sbjct 37653 TCACTGGTATTCCACCTGCTCCTCGTGGTGTTCCACAAATCGAGGTCACCTTCGATATTG 37712 Query 350628 ATTCAAATGGTATTTTAAATGT 350649 || | || ||||| | ||||| Sbjct 37713 ATGCCAACGGTATCATGAATGT 37734 >seq3136 Length=22676 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||| || || |||||||| || || || || || Sbjct 19723 CATACCACCACGGAGACGAAGGACCAAATGCAGTGTGGACTCTTTCTGGATGTTGTAGTC 19782 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| || || ||||| |||||||| || ||||||||||| ||||||||||| || || Sbjct 19783 TGATAGAGTGCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCCGG 19842 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||| || || || | ||| || || || || | ||| || | || Sbjct 19843 TGGGATACCCTCCTTATCTTGGATCTTTGATTTCACGTTGTCGATGGTATCTGACGACTC 19902 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | ||| | |||||||||||| ||||| || || || || ||||| Sbjct 19903 AACCTCCAATGTGATTGTCTTTCCGGTAAGTGTCTTGACGAAGATTTGCAT 19953 Score = 127 bits (140), Expect = 6e-24 Identities = 159/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || ||||| ||||||||||| |||||||| || | Sbjct 20227 TTTGCATACCGCCACGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTTTGAATGTTGT 20286 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || ||||||||||||||||| || || ||||| | || || || | Sbjct 20287 AGTCGCTCAAGGTACGGCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAGCGCTGTTGGT 20346 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || |||||||| || ||||||||||| || ||| ||||| || || || | ||| | | Sbjct 20347 CCGGGGGAATTCCCTCCTTATCCTGAATCTT-GCTCTTTACGTTGTCGATGGTATC-GCT 20404 Query 140682 GG-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || || || | ||||| ||||| Sbjct 20405 GGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 20437 Score = 118 bits (130), Expect = 3e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | ||||| || || |||||||| || || | Sbjct 19947 TTTGCATACCACCACGAAGGCGGAGCACCAAGTGAAGGGTGGATTCTTTTTGGATGTTGT 20006 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || |||||||| |||||||| ||||| ||||| | |||||| |||| Sbjct 20007 AGTCGCTCAGGGTGCGACCATCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGTTGAT 20066 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || ||||| || || | || ||||| || || | || || | Sbjct 20067 CCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACG 20126 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || ||||| || | ||||| || || || || || || Sbjct 20127 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGAC 20169 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || |||||||| | |||| ||||| || | || ||||||||||| Sbjct 19534 CTCCTTCTGAATGTTGTAATCAGAAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCAAA 19593 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| | || || || || || || || || || || || ||||| || | || ||||| Sbjct 19594 GATCAATCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGAATCTTTGACTTGACATT 19653 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||| | ||| || | ||| ||||| | ||||| |||||||| || | || || || Sbjct 19654 GTCAATGGTATCTGACGATTCCACTTCCAATGTAATGGTCTTTCCAGTCAAAGTCTTGAC 19713 Query 140726 AAAAATCTGCAT 140737 || |||||||| Sbjct 19714 GAAGATCTGCAT 19725 >seq34 Length=19952 Score = 149 bits (164), Expect = 2e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||||| | || || | |||||||| || || ||||| || || || || || Sbjct 14243 CCACCACGTAGACGAAGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAA 14184 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || |||||||| ||||| || || || ||||| ||||||||||||||||| || Sbjct 14183 AGGGTGCGTCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGATCAGGTGGG 14124 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||| || || ||||| || || | || ||||| || || | |||||| | |||||| Sbjct 14123 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGATTCAACC 14064 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || || || || ||||| || || |||||||| Sbjct 14063 TCGAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 14017 >seq1181 Length=31466 Score = 136 bits (150), Expect = 1e-26 Identities = 209/294 (71%), Gaps = 8/294 (3%) Strand=Plus/Minus Query 378184 TCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTT 378243 |||||| | |||| | |||||| | ||||| | ||| || || ||| ||||||||| Sbjct 14678 TCATATTTCGCCATGACATCTTCAAGAGCTTTGACAAGACGACGTTGAATGTAACCAGTT 14619 Query 378244 TGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAAT 378303 | || || ||||||||||| || ||||| |||||||| |||| || |||||||| Sbjct 14618 TCTGCGGTCTTGACTGCAGTATCGATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAG 14559 Query 378304 AATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGC 378363 |||||||| || ||||| || | || | ||||| |||||| || ||||| | | || Sbjct 14558 AATTCAGTGGGGGTAAGACCTCTAAGATATGAATTCTCAACGAAACCTCTCGATTCAGGA 14499 Query 378364 GAATCATCATATTTTGTATAATGAGGTAATGTAC-GATTCTCAAACCCATATGGAATTCG 378422 || | ||||| || || |||| ||||| || | | | | ||||| | | || || || Sbjct 14498 GAGTAATCATCCTTAGTGAAATGCGGTAAAGTTCTGTATTTGAAACCGA-ACGGGATACG 14440 Query 378423 TTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCAATATT 378473 || || || ||| ||| |||| | |||||||| |||||| | ||||| Sbjct 14439 CTTACCCTCGACAGACTGCTGACCCACGAGTGCAGA---CATTTGGGAGATATT 14389 >seq1378 Length=23736 Score = 120 bits (132), Expect = 9e-22 Identities = 244/363 (67%), Gaps = 6/363 (2%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | |||||| |||||| | | |||| |||||||| ||||| Sbjct 7359 AAGATGAAGGAGACTGCTGAGGCATATCTCACCAAGCCAGTTCAAAATGCTGTTGTTACT 7418 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || || || | || || ||||||||||| || ||| || || Sbjct 7419 GTTCCCGCCTACTTCAACGACTCACAACGCCAGGCAACAAAAGACGCAGGCCAAATCGCC 7478 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || || || ||||| ||| || |||| ||||| |||||||| ||| |||| || || || Sbjct 7479 GGTTTGAACGTTCTCAGAGTGGTTAACGAACCTACTGCTGCCGCACTTGCCTACGGTCTC 7538 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || ||| ||| | || ||| |||| | | ||||| ||||| || || || Sbjct 7539 GAGAAA------GACGAGGACAAAGTTATTGCCGTCTACGATTTGGGTGGAGGAACCTTC 7592 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 ||| | || | || | | || |||| |||| ||||| || | || |||||| Sbjct 7593 GATATCTCTGTCCTCGAAATACAAAAGGGTGTTTTCGAAGTCAAGTCTACAAATGGTGAC 7652 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921 || || | ||||| ||||| || |||| || || ||| || || || || |||| Sbjct 7653 ACTCACTTGGGTGGTGAAGACTTCGATATTCACCTTGTTCGCCACTTGGTGCAACAATTC 7712 Query 349922 AAG 349924 ||| Sbjct 7713 AAG 7715 >seq449 Length=22889 Score = 104 bits (114), Expect = 7e-17 Identities = 720/1148 (63%), Gaps = 39/1148 (3%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| || || | ||| || | | |||||||||||| | || ||| |||| || Sbjct 21228 CCAGAAGAGATCTCCGCCATGATTCTTGGTAAAATGAAGGATGTCGCCGAATCATACTTG 21287 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | |||||| |||| || |||||||| || || ||| |||| | Sbjct 21288 GGAAAGAAGGTCACCCACGCTGTTGTTACAGTTCCAGCCTACTTCAACGATAACCAGAGA 21347 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || | |||||| || || | || || | || | |||||| Sbjct 21348 CAAGCCACTAAGGATGCCGGTACCATTGCCGGTTTGGAAGTCCTTCGTATCGTCAATGAA 21407 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || ||||| ||||| || || | || || || ||| |||| | || Sbjct 21408 CCCACCGCCGCAGCTATTGCCTACGGTTTGGACAA---GACTGAAGGAGAACGTCAAATC 21464 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 | | | ||| | ||||| || ||||| ||||| || || || | | || || Sbjct 21465 ATCGTCTACGATCTCGGTGGAGGAACTTTCGATGTTTCCCTTCTTTCCATCGACCGTGGT 21524 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 |||| || || |||| || ||||| || || | || ||||||||||| ||| | Sbjct 21525 GTTTTCGAGGTCCTTTCAACCGCCGGTGACACTCACTTGGGAGGAGAAGATTTCGATCAA 21584 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA----ATTGATATTGG 349947 | || || | || | || ||| ||| |||| || | || || Sbjct 21585 AGAGTCATTAACTACTTCGCCAAGAAATATAA----CAAGGAGAACAGCGTCGACATCAC 21640 Query 349948 AGATAATC-CTAGAGCAATGCGTCGCCTAAGAACTGCGTG----TGAACGTGCTAAGCGT 350002 | ||| | ||| | ||| || || | ||||| ||| || |||||| Sbjct 21641 GAAGGATCTCAAGA-CTATGGGTAAACTCA----AGCGTGAAGCTGAGAAGGCCAAGCGT 21695 Query 350003 TCCTTATCAT-CTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGA 350061 | || || | | | | | | || | |||||||| || | | ||||||| || Sbjct 21696 ACTTTGTCTTCCCAAAAGACTACCCGC-ATTGAAATCGAAGCGTTCCACAATGGCAACGA 21754 Query 350062 TTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGC 350121 |||| | || |||| | || ||| || || | ||||||||| || | || Sbjct 21755 CTTCTCTGAGACTCTTACCAGAGCCAAGTTCGAGGAGCTCAATATGGATCTCTTCA-AGA 21813 Query 350122 A-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTG 350180 | || | | ||||| ||| |||| | || || || || | || || || ||| Sbjct 21814 AGACTCTCAAACCTGTCGAACAAGTTCTCAAGGACGCTAAGGTCAAGAAGAACGAGGTTG 21873 Query 350181 ATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTG 350240 |||| | || || || |||||||| || ||||||||||| ||| ||| ||| || Sbjct 21874 ATGACATCGTCTTGGTCGGTGGTTCCACTCGTATTCCAAAGGTT---CAGGAACTCATTG 21930 Query 350241 AG--TTTTTTAATGGCAAAGAA--CCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 || | || | ||||| || | || || || || ||||| ||||| || Sbjct 21931 AGGAATACTTCGGAGGTAAGAAGGCCAGCAAG-GGTATCAACCCTGATGAGGCTGTCGCT 21989 Query 350297 TATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGAT 350356 | ||||| |||||||| | | |||| || ||| | | || | |||||| Sbjct 21990 TTCGGTGCCGCTGTTCAAGGTGGTGTTTTGTCCGGAGAGGAAGGT------ACTGATGAC 22043 Query 350357 CTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATG 350416 | | || | ||||| | ||| | | ||||| | || ||| |||| | || ||| Sbjct 22044 ATCGTTCTCATGGATGTCAACCCATTGACTCTTGGTATTGAGACTACTGGAGGTGTTATG 22103 Query 350417 ACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACA 350476 || | || || ||||| | | | ||||| || || |||| || || ||| Sbjct 22104 ACCAAGTTGATCCCAAGAAACACCGTTATCCCTACCCGCAAATCTCAAATCTTCTCCACA 22163 Query 350477 TTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACT 350536 || || || || || | || |||||||| | |||||| || |||||| || Sbjct 22164 GCCGCCGACAACCAACCCGTAGTCCTGATTCAAGTCTATGAAGGAGAGCGTGCTTTGACA 22223 Query 350537 AAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGA 350596 ||||| || || || ||||| |||| | | || ||||||||| || | || Sbjct 22224 AAAGACAACAACAACCTTGGTAAATTCGAATTGACTGGTATTCCACCAGCACCACGTGGT 22283 Query 350597 GTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCA 350656 |||||||| |||||||| || ||||| |||| | ||||| || || || |||||||| Sbjct 22284 GTTCCTCAAATTGAAGTTTCCTTCGAACTTGACGCCAATGGAATCTTGAAGGTTACCGCT 22343 Query 350657 GTTGAAAA 350664 | ||| || Sbjct 22344 GGTGACAA 22351 >seq429 Length=29046 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 350142 AAGTATTAAAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGG 350199 |||| | || ||||| || || | | ||||| || ||||||| | || | ||||| Sbjct 455 AAGTTCTCAAGGATGCTAACAT--CGACAAATCCAAGGTTGATGAGATCGTCCTTGTTGG 398 Query 350200 TGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA 350259 ||| ||||| |||||||| || |||||| || | | ||||| || || || ||||| Sbjct 397 TGGATCTACCCGTATTCCCAAGGTTCAAAAGCTCTTGAGCGAGTTCTTCAACGG-AAAGA 339 Query 350260 ACCTTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCA 350317 | || ||| | ||||| || ||||| |||||||| || |||||||||||||| || Sbjct 338 AG-TTGGAGAAAAGCATTAACCCTGATGAGGCTGTTGCTTACGGTGCTGCTGTTCAAGCG 280 Query 350318 TCTATTTTATCTGGAAA 350334 ||| | || ||||| Sbjct 279 GGTATCCTCTCAGGAAA 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515171132509067