Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq27 143 6e-29 >seq27 Length=812739 Score = 143 bits (158), Expect = 6e-29 Identities = 183/252 (73%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || || | ||| |||||||| || || ||| |||| ||| Sbjct 400656 ATCATCACTGAGGCTGTGGAGATCGAGCAGGAGTTCCTTACCGAGGCTCTTCCCTGTGCT 400597 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | ||||||||||| | || ||| | |||||||| || || || || ||||| | Sbjct 400596 CTGCTGGGCATGAACGCCAACCTCATGTGCCAGTACATTGAGTTTGTCGCTGACCGTCTG 400537 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | || ||||| || || || |||||||| | |||||||| | || |||||| Sbjct 400536 CTCTTGGCTCTTGGCAACACCAAGGTATACAACTCCACAAACCCCTTCGACTTCATGGAG 400477 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| |||||| || |||||||||||||| || ||||||||| ||||||| |||| | Sbjct 400476 AACATCTCGCTTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTACCAGAAG 400417 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 400416 GCTGGTGTCATG 400405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820096629440