Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq27 104 2e-17 >seq27 Length=812739 Score = 104 bits (114), Expect = 2e-17 Identities = 125/169 (74%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 17224 TAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282 |||| ||| | ||||| || |||||||| || ||| |||| ||||| |||||||||| Sbjct 401017 TAGGCTCGCTGATATAGGTGTCGATGAGGAGAGAGTAGGTTTCCGAGTGGATGTTCTCCA 401076 Query 17283 TGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATC 17342 | ||||| || ||||| |||||||| ||||| | |||||| || || | |||||| Sbjct 401077 TCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCGGGTATTTGGACCTCGCTGGAGAATC 401136 Query 17343 GTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | || | || || ||||| || ||||| ||| || ||||| || || Sbjct 401137 GCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAAAGC 401185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543736835840