Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq82 98.7 8e-16 >seq82 Length=92890 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| |||||||| || || ||||||||||||| | ||| | ||||| Sbjct 12737 AGGACCAAGTGCAATGTGGACTCTTTCTGAATGTTGTAGTCGGAAAGTGTTCGGCCGTCC 12796 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || || | || || ||||| ||||| ||| | ||||| || || Sbjct 12797 TCCAACTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 12856 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | ||||||| | ||| ||||| |||||||| Sbjct 12857 TGGATCTTGGACTTTACATTGTCGATTGTGTCGCTCGACTCAACTTCCAATGTGATGGTC 12916 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||| || ||||| || |||||||| Sbjct 12917 TTTCCAGTCAGTGTCTTGACGAAGATCTGCAT 12948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086578141120