Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq82 120 3e-22 >seq82 Length=92890 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||||||| ||| || ||||| ||||| || | || || || |||| || Sbjct 12740 ACCAAGTGCAATGTGGACTCTTTCTGAATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCC 12799 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | ||||||||||||||| ||||| ||||||||||| | || | | |||||| ||| | Sbjct 12800 AACTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGG 12859 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || || | | | | ||||||||||| || || || | |||||||| || Sbjct 12860 ATCTTGGACTTTACATTGTCGATTGTGTCGCTCGACTCAACTTCCAATGTGATGGTCTTT 12919 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| || ||||| ||||| Sbjct 12920 CCAGTCAGTGTCTTGACGAAGATCTGCAT 12948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210844433920