Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq22 120 4e-22 >seq22 Length=685860 Score = 120 bits (132), Expect = 4e-22 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 |||||||| ||||| ||| || || ||||| || | || ||| | || |||| Sbjct 322048 ATTATGATCACATACCCAAGCACGTTCGGCGTATTCGAGCCCAAGGTCAAAGAGGCATGT 322107 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | ||||| || | ||||| || || ||| | || |||||||| | || ||||| Sbjct 322108 GATTTGATTCATCAGCACGGTGGCCAAGTTTATATGGACGGTGCAAACATGAACGCACAA 322167 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 | ||||| ||| |||| || || ||||| || ||||| ||| | || ||| Sbjct 322168 ATTGGTCTCTGCTCACCCGGTGAGATCGGCGCTGATGTGTGCCATCTCAACCTTCACAAG 322227 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786 |||||||||||||| || || ||||| ||||| || || || ||||| |||||| || Sbjct 322228 ACATTCTGTATTCCTCACGGTGGTGGTGGTCCAGGTGTTGGCCCTATCGGTGTAAAGGAA 322287 Query 159787 CATCTCACACCATT 159800 ||||||||||| || Sbjct 322288 CATCTCACACCTTT 322301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049083015680