Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21]
288 sequences; 32,067,383 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq82 100 2e-16
>seq82
Length=92890
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | |||| |||||||||||||| ||||| ||||| |||| | || |||
Sbjct 12740 ACCAAGTGCAATGTGGACTCTTTCTGAATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCC 12799
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| || || || || || || || |||||||| | || | |||||||| ||
Sbjct 12800 AACTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGG 12859
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| || || || | ||||| || | | |||||| || | || |||||
Sbjct 12860 ATCTTGGACTTTAC--AT--TGTCGATTGTGTCGCTCGACTCAACTTCCAATGTGATGGT 12915
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || || ||||| || ||||||||||||
Sbjct 12916 CTTTCCAGTCAGTGTCTTGACGAAGATCTGCATA 12949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632460536064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |