Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq82 120 2e-21 >seq82 Length=92890 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || |||||||| | ||| || || |||||| | || || || | ||||| Sbjct 12955 ACGCAGGCGGAGTACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGAGT 13014 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| ||||| ||||| || || ||||| ||||| || |||||||| || Sbjct 13015 GCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGAGGAATACC 13074 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||||||||| ||||| || || || || | || | | || | Sbjct 13075 TTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATTGTGTCCGATGATTCCA-CCTCCA 13133 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || || |||||||| ||||||||||| Sbjct 13134 GGGTAATTGTCTTGCCAGTCAGAGTCTTGACGAAAATTTG 13173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268166846282624