Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq82 86.0 1e-11 >seq82 Length=92890 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||| |||||||| | |||||| ||| || |||||||| | |||| Sbjct 12734 CGGAGGACCAAGTGCAATGTGGACTCTTTCTGAATGTTGTAGTCGGAAAGTGTTCGGCCG 12793 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || || || || || | | ||| || |||||||| || || || ||| Sbjct 12794 TCCTCCAACTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTA 12853 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| |||| ||| || || ||| ||||||||||| | || || Sbjct 12854 TCCTGGATCTTGGACTTTACATTGTCGATTGTGTCGCTCGACTCAACTTCCAATGTGATG 12913 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || ||||| Sbjct 12914 GTCTTTCCAGTCAGTGTCTTGACGAAGATCTGCAT 12948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899651161244160