Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq13 100 2e-16 >seq13 Length=1064643 Score = 100 bits (110), Expect = 2e-16 Identities = 205/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | ||||||||| |||||| ||||| || Sbjct 293118 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGGAGATGAAGCCATCGAGG 293059 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||||| | || || ||| |||| ||||||||| || |||| || | ||| Sbjct 293058 TAGTCCTGGAGTTTGCTGGCGTCATGGGCGCCGTTGACAATCCATCGGTCATCATTGGGG 292999 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 | | | || || || || || ||| | || ||||| || | || | || || Sbjct 292998 TTGGTATTTGTCTGAGCTCCAAGTTCGAAGCCAAAGTATTTGATGACGTGAGCGGGTGGG 292939 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || | || | | || | | || ||||||||||||||||||||||||||| ||| Sbjct 292938 CGGGCCAGGGAGTGAGCAACGCTGCTCAGGTTGACGATGACAGTCTTGATGCCGTTACCC 292879 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 |||||||| | |||| || ||| ||| |||||||||||||| | ||| | ||| Sbjct 292878 TTTCCTTCAATTTTGGACTGGAGACGCTCCATCTTGTAGCGGTAGAAGGGGTCGGTGACA 292819 Query 34618 TTGCG 34622 | ||| Sbjct 292818 TCGCG 292814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840150925984