Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq82 84.2 2e-11 >seq82 Length=92890 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || || || ||||| || | ||| ||| | || Sbjct 12948 ATGCAGATCTTCGTCAAGACACTGACTGGAAAGACCATCACATTGGAAGTTGAGTCGAGC 12889 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | ||||| ||||| ||||| || || | || || ||| Sbjct 12888 GACACAATCGACAATGTAAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGACCAG 12829 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || ||||| ||| ||||||||| | |||| | | ||||||||| Sbjct 12828 CAGCGCCTCATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAAC 12769 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| || ||||| || |||||| |||| Sbjct 12768 ATTCAGAAAGAGTCCACATTGCACTTGGT 12740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875399942432