Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq27 82.4 7e-11 >seq27 Length=812739 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || ||| | |||| ||||||||| || ||||| ||||| Sbjct 401137 GCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAAAGCGAGGACGTGGG 401196 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | || ||||| ||||||||||| | || |||||||| | Sbjct 401197 AGATGAAGAAGCGCTCGTCATCATTCAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAGA 401256 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 || |||||||| | ||||| || | | ||||||||||| ||||||| Sbjct 401257 GATCAATCTCTTCTGCGGTCCAGAAGGAAGCTTCGGCCTTCTTGTAGAATTGCCA 401311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092797660160