Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq82 105 6e-18 >seq82 Length=92890 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||||||| | || || ||||| || || ||||||||| Sbjct 12950 CCACCACGCAGGCGGAGTACCAAATGGAGGGTCGATTCTTTCTGGATGTTGTAGTCGGAG 13009 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| ||||| || || ||| | |||||||||||||| || || || Sbjct 13010 AGAGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGGTCTGGAGGA 13069 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || |||||| || | | | || | ||||| | | ||| || Sbjct 13070 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATTGTGTCCGATGATTCCACC 13129 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||||||| || || || ||||||||| Sbjct 13130 TCCAGGGTAATTGTCTTGCCAGTCAGAGTCTTGACGAAAATTTGCATA 13177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932908480256