Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Shiraia_20sp._20slf14_20[genbank_20GCA_5F000498155.1_202013-11-21] 288 sequences; 32,067,383 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq27 93.3 1e-13 >seq27 Length=812739 Score = 93.3 bits (102), Expect = 1e-13 Identities = 118/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || || |||| ||||| || | || || || ||| |||| || ||||| Sbjct 400860 CGCCTTGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGCTCCTTT-GCTTCCAT 400802 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 ||| ||| | || |||||||| || |||| |||||||||||| ||||| || ||| Sbjct 400801 CTTTTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTC 400742 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 ||| || ||||| |||| |||||||| || || | |||| Sbjct 400741 TCGTGATGAGGGCATGCACTGCGACTTTGCTTGCTTGCTCT 400701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588330139040160