Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq22 109 1e-18 seq19 89.7 1e-12 >seq22 Length=2936705 Score = 109 bits (120), Expect = 1e-18 Identities = 309/469 (66%), Gaps = 8/469 (2%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| ||||||| || || | | || || ||||| | || ||| |||| Sbjct 2568650 TTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCTTTC 2568709 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | | ||||||| |||||| ||| || ||||||| ||||| | || |||||| Sbjct 2568710 TCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAG 2568769 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351 | ||| || ||||||||||| || || | | || | | || ||| || | || Sbjct 2568770 CTGATCTCGCGTGACGAGGGTCTGCA-CACCGACTTTGCCTGCCTGCTGTTCTCTCACCT 2568828 Query 230352 CCAGAACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAA 230408 ||||| | ||| | || ||||| | | |||||| || || || | | Sbjct 2568829 GAAGAACCGCC--CCAG-CAAGCAGGTCATTGAGGACATCATTGTCGATGCTGTCAAGAT 2568885 Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468 ||| |||||||| | || ||| | || ||| ||| | ||||||||||| || Sbjct 2568886 CGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTGTGCCCTGCTGGGCATGAACGCCACCCT 2568945 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| |||||||| || ||||| |||||||| | | || || || || ||||||| Sbjct 2568946 GATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTGGTCGCTCTCGGCAACGAGAA 2569005 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 |||||| | | | ||||| || | || |||||| ||| || || || ||||| Sbjct 2569006 GGTGTACCGCGCCACCAACCCGTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGAC 2569065 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||||| ||||| || | || || |||| | | ||||| ||| Sbjct 2569066 CAACTTCTTCGAGAAGCGCGTTGGCGAGTACCAGAAGGCCGGTGTCATG 2569114 >seq19 Length=4558656 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || |||| ||| |||| || |||||||||||||| || || || | || Sbjct 2535043 GGGGAAGCCCTCAACCTGCTCGTTGTTGATGGCGCGCATCAGGGTGGACTTGCCGGAACC 2535102 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || || |||||||||||||| | || || |||||| | | || | |||||| Sbjct 2535103 GTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGGCGCAGGTGGGTCTGGTTCAG 2535162 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||| || |||| || || || || || || | ||||| |||||||| Sbjct 2535163 CAGAATCTTGGCACCGTAGGCAAGGGAGAACGTGCAGTTGCACAGGTCCTCACC 2535216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823674719120