Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq18 159 4e-34 >seq18 Length=5350014 Score = 159 bits (176), Expect = 4e-34 Identities = 279/401 (70%), Gaps = 4/401 (1%) Strand=Plus/Minus Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 || |||||| |||||| | | ||||||||||||||| |||| ||||||||| Sbjct 544048 CGACACGTAAAACTGGGCAAACATGTGGCAGGGCGGCAGCACCATCTGCGGCAGGTCCCG 543989 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC-TTGATCTCCCCTA 145984 |||||||||||| | |||| | | || | || || | || |||| || | | Sbjct 543988 CGGGTTCCAGGCCGACAGGAGAATGCGCCGG-TCAAACGGCGCGTCCTTGAGCTTGCGCA 543930 Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044 || || |||||||| |||||||| ||| || || || | | |||| ||||| Sbjct 543929 CCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGCATAGTCGGTGTGCGGGTCCTTGTACG 543870 Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 |||| || ||||| | ||||||||| |||||||| || |||| ||| ||| ||||| || Sbjct 543869 CGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACCGGGCCCAAGTCGCCGTCCTCCCGGT 543810 Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 | | || | || | ||||| | || || |||||| |||||||||||||||||| Sbjct 543809 CCGTGAAGCCCATCTGGTCCAGGAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGACGC 543750 Query 146165 CCCTCGCGGAGAGC-TCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223 || |||||| ||| || | | || ||| || | | |||||| |||||||| ||| Sbjct 543749 CCTTCGCGGCCAGCGTCGTCGACGT-CGTCTCGCCGCGCACGAACCACAGCAGCTCCTCG 543691 Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | ||| | | | ||||| | |||||| || || || || Sbjct 543690 ATGACAGCGCGCGTAAAGACACGCTTGGTTGTGAGGAGCGG 543650 Score = 141 bits (156), Expect = 1e-28 Identities = 227/319 (71%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 || || | ||||| ||| | || ||| || |||| ||| ||||| | | |||||||| Sbjct 544464 TACACGGACATCTTCATCGCAATCGCCTTGTACGGGTTGTACCCCTCAATCACAAAGTCC 544405 Query 145597 TCCGCCCTGA-AGTCATCTATGTCCTCCACCCGCC--TCAGGATCCTGAGCCTGGGAAAG 145653 || | ||| || | || ||| || | ||| | | ||||| | ||| | || ||| Sbjct 544404 TC-GAGCTGCCAGCCGTCAATG--CTGCTGCCGTCGTTGCGGATCGTCAGCGTTGGGAAG 544348 Query 145654 GGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTG 145712 | |||||| | | | || ||||| || || | || ||||||| || ||||||||| Sbjct 544347 GCCCGGGG-CACGCGCTCCAGCTGCGTCTCCAAAGCGTCGACGTGGTCGACGTAGACGTG 544289 Query 145713 CGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCAT 145772 ||| || |||| ||||||| | | |||||| ||||| | || | | || | ||| Sbjct 544288 CGCATCGCCCATGACGTGGGTCAGCGAGCCGGGCACGAGGTCGCAGACGCGCGCCAGCAT 544229 Query 145773 GTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGA 145832 || |||||| |||| ||| ||| |||||||||||||| || || |||||||| | || Sbjct 544228 GTGGGTCAGGAGGGCGTACGAGGCGATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGA 544169 Query 145833 GCGCTGGTACAGCTGGCAG 145851 ||||||||| ||||||||| Sbjct 544168 GCGCTGGTAGAGCTGGCAG 544150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076622976960