Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq19 134 1e-26 seq1 100 2e-16 seq22 98.7 9e-16 >seq19 Length=4558656 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | |||||||| ||||| || ||||| || || |||||||| |||||| Sbjct 3388026 CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3388085 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| |||||| ||||| || || ||| | || |||||||| || || || || Sbjct 3388086 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGA 3388145 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | |||| |||||||| | ||||||| Sbjct 3388146 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 3388205 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || ||||| || || || || || || |||||||| Sbjct 3388206 TCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||| ||| | || ||||| || || ||||||||||| Sbjct 3387796 TACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAG 3387855 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||| ||||| || ||||| |||| || |||||||| || || | Sbjct 3387856 AAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCG 3387915 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| ||| || || || | || | ||||| ||||||| | Sbjct 3387916 GGATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCA 3387975 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||| ||| | || ||||| ||||| || || || |||||||||||| Sbjct 3387976 CCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCATG 3388025 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||| | ||||| || || ||||| || || ||| | Sbjct 3388289 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAA 3388348 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || || ||||| || || || || |||||||||||||| ||| || || || | Sbjct 3388349 AATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 3388408 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||| |||| ||||||||| | ||| | || |||||||| || || || || Sbjct 3388409 GTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCAC 3388468 Query 118727 AAAAATCTGCATGG 118740 ||| |||||||||| Sbjct 3388469 AAAGATCTGCATGG 3388482 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | || ||||| ||||| || ||||| || || |||||||| ||| Sbjct 3387569 ACCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 3387628 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || || || ||||| ||||| || || || |||| || |||||||| || || || Sbjct 3387629 CAGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGG 3387688 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 |||||||||||||| || || || || | || | |||||| | ||| || Sbjct 3387689 GATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCAC 3387748 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | ||| | ||| ||||| ||||| || || || || || ||||| Sbjct 3387749 CTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 >seq1 Length=6771991 Score = 100 bits (110), Expect = 2e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||| ||| | || ||||| ||||| |||||||| || Sbjct 3549062 TACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCG 3549121 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| ||||| | ||| || || ||| | || || |||||||| || || | Sbjct 3549122 ACAGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGG 3549181 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | |||| ||||||| | ||||| Sbjct 3549182 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGA 3549241 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 |||| | ||| | || |||||||| || || || || || Sbjct 3549242 CCTCCAAGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 3549281 >seq22 Length=2936705 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| || | ||||| ||||||||||| || || || | Sbjct 228229 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAA 228170 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||| || || || || |||||||||||||| || || || || | Sbjct 228169 GATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 228110 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| | ||| || ||||| | ||| | |||||||| || || || || || Sbjct 228109 GTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGAC 228050 Query 118727 AAAAATCTGCAT 118738 ||||||||||| Sbjct 228049 GAAAATCTGCAT 228038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830273104608