Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq19 122 1e-22 seq22 114 1e-20 seq1 98.7 1e-15 >seq19 Length=4558656 Score = 122 bits (134), Expect = 1e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| |||| ||| |||||| || || |||||||||| ||||| || | Sbjct 3387810 CGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCA 3387869 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| ||||| || || || ||||||||||| | ||| | | ||||||| Sbjct 3387870 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTG 3387929 Query 43089 TCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| | || | |||| | | | |||||||| ||||| |||| || || Sbjct 3387930 TCC-TGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAAT 3387988 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||||||| || ||||| || || || ||||| Sbjct 3387989 GGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | || |||||| || || ||||| || | ||| || || | Sbjct 3387581 ACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCC 3387640 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || || || ||||||||||| | ||| | || |||||| Sbjct 3387641 GTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTT 3387700 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || || | ||| | | | |||||| ||| ||||| || | |||| Sbjct 3387701 GTCCTGGATCTTGGACTTCA-CGTTGTCAATGGTGTCGGACGACTCCACCTCCAGGGTGA 3387759 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || |||||||| || ||||| || ||||||||||| Sbjct 3387760 TCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 105 bits (116), Expect = 8e-18 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| ||||||||||| || || ||||| || || || || |||| || ||||| Sbjct 3388277 ATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 3388336 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| || ||||| || || ||||| ||||| | || | || |||||||||| ||| | | Sbjct 3388337 CTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCT 3388395 Query 43100 TTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCC 43157 | | |||| ||| | | | || || ||| || || || | |||||||| ||||| Sbjct 3388396 TGGACTTGA-CGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCG 3388454 Query 43158 GTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| |||||||| ||||| Sbjct 3388455 GTAAGGGTCTTCACAAAGATCTGCAT 3388480 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| || | || |||||| || || ||||| || ||| || || | Sbjct 3388037 ACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACC 3388096 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || || ||||| ||||| | || | || |||||| Sbjct 3388097 ATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTT 3388156 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || |||| ||| | | | ||||| || || || || | ||| | Sbjct 3388157 GTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTAA 3388215 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| || || ||||| || ||||| ||||| Sbjct 3388216 TGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 >seq22 Length=2936705 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||| |||| ||||||||||| || || ||||| || | || || || || Sbjct 228252 CGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCG 228193 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || || || || || ||||| ||||| | ||| | || ||||||| Sbjct 228192 TCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTG 228133 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| |||||| || | |||||| Sbjct 228132 TCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATG 228073 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||||||||||| || ||||| || || || ||||| || Sbjct 228072 GTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 228035 >seq1 Length=6771991 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| ||| ||||||||| || ||||| || | ||| || || |||| || Sbjct 3549081 CACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTC 3549140 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | |||||| || ||||| || || ||||||||||| | || | || |||||||||| Sbjct 3549141 CAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 3549200 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || |||| | | | |||||| || || || || | |||||||| || Sbjct 3549201 GATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTT 3549260 Query 43154 GCCCGTTAGCGTCTTTACAAAG 43175 ||| || || ||||| || ||| Sbjct 3549261 GCCGGTAAGGGTCTTCACGAAG 3549282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817428454720