Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 2e-14 >seq18 Length=5350014 Score = 95.1 bits (104), Expect = 2e-14 Identities = 439/686 (64%), Gaps = 18/686 (3%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 || || || || || || ||||| | | |||||| || | | | || || ||||| Sbjct 3718655 CCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCATG 3718596 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || || || |||||||| || || | || || || | || | |||||| || || Sbjct 3718595 AACAGGTCCGGAATCCACAGGGCCAGGAACAGGTCGCGGGCGCGCACCTCCTCCTTGCCG 3718536 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| || ||||||||| | | | || |||||||| || | ||| ||| Sbjct 3718535 TGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGCCGTGCCACGGCTCGAGGTAGATG 3718476 Query 72154 GCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 || || | || || || ||||| || ||||| || | || | |||||||| || Sbjct 3718475 --CAGAAGGCACCGGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCGGTGTTGTTGA 3718418 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | || | || ||| ||||| || || ||||| | || || || |||| || ||| | Sbjct 3718417 ACACACGCAGCATGGGAATGATGCCGTTGGACGTGCCGTTAGTGCCGGCAATGTAGGAGC 3718358 Query 72272 CACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 | |||| || || | | || || || || || ||| | || ||||| | | Sbjct 3718357 CCGTGGCGCGGATGCGGTGGACGTTCAGGCCAATACCACCGGCCGTCTTGGAGATCATGG 3718298 Query 72332 CGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 |||| ||| || | ||| || ||||||||||| || || || ||| | |||| | || Sbjct 3718297 CGCA-CGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTGATGTCGACGAGG 3718239 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 ||||| |||| ||| | || || || || || | || || || || ||| Sbjct 3718238 AAACACGAGGACAGCTGGGCCTGCGGGGTGCCGGCGTTGAAAAGCGTCGGCGAGGCATGC 3718179 Query 72451 GTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAAT----AGCTGATTCTATATC-C 72504 || || | || | |||| |||| ||||| |||||||| ||| | | | | || | Sbjct 3718178 GTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAATGACACGCTCAATGT-TGTCGC 3718121 Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 | |||| || || || |||||||| | ||| |||||||| | || || || ||| Sbjct 3718120 CCCAGATG----CCGACAGCCACACGCATGATCATGTGCTGAGGGCGCTCGACAATTTTG 3718065 Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 | | || | || ||||| || | || || || ||||| || | ||| Sbjct 3718064 CCGTCGAGCTTGAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTG 3718005 Query 72625 AAGTCTCGTTCGTAAATAATAACCGA 72650 ||||| || ||||| | ||| |||| Sbjct 3718004 AAGTCACGGTCGTAGACAATGGCCGA 3717979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138998658240