Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1 140 2e-28 seq18 120 2e-22 seq19 109 4e-19 seq22 96.9 2e-15 >seq1 Length=6771991 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5671953 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5671894 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5671893 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5671859 >seq18 Length=5350014 Score = 120 bits (132), Expect = 2e-22 Identities = 209/304 (69%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 6183 CGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAG 6242 ||| |||| |||||| ||||| |||||||| ||| ||| ||| ||||| ||||| Sbjct 4544435 CGTGATGTCACGGACGTCTTCTATCGCTACAAGATGGAGCGTATCCAGACCAAGATCGAG 4544494 Query 6243 GGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTC 6302 || ||||| |||||||| || |||||| | ||| || | ||||| || ||| Sbjct 4544495 GGCAAGGGCAACGGTATCAAGACCGTCGTGCCGAACCTGAGCCAGGTCGCGCAGCAGCTG 4544554 Query 6303 GGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAG 6362 | ||||| | | |||||| | || || || || | || || ||||| ||||| | Sbjct 4544555 GCCCGCCCGGGCGCCTACCTTATCAAGTACTTTGGCTTTGAGCTCGGCGCCCAGACCAAC 4544614 Query 6363 TTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAG 6422 |||| | |||| |||| ||| | ||||| | || | | ||||| || ||| Sbjct 4544615 ATTGACCCGCCTGACGACCGCTGGATCATCAACGGCGCCCACGAGGCCGCCAAACTCCAG 4544674 Query 6423 GACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAG 6482 |||| || |||||||| || |||||||||||| || | | ||| | ||||| ||| Sbjct 4544675 GACTACCTCGACGGCTTCATCACCAAGTTTGTGCTCTGCAAGAAGTGCCAGAACCCCGAG 4544734 Query 6483 ACCG 6486 |||| Sbjct 4544735 ACCG 4544738 >seq19 Length=4558656 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || |||| ||||| || || ||| |||||| || || |||||||||| Sbjct 3387796 TACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAG 3387855 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | ||| | || || | || || || ||||| || ||||| || || || | | Sbjct 3387856 AAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCG 3387915 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || |||||| ||| || ||| ||||| | | ||| || | || || | Sbjct 3387916 GGATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCA 3387975 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | ||||| || || ||||||| ||| || ||||| ||||||||| Sbjct 3387976 CCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCATG 3388025 >seq22 Length=2936705 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || |||| |||| || || ||||||||||| || || ||||| || || Sbjct 228265 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 228206 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || |||| || | || || || ||||| || ||||| ||||| || | || Sbjct 228205 AAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGG 228146 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||| || |||||| || || ||| ||||| | || || || ||||| || Sbjct 228145 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCAC 228086 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | || || ||||| ||||| | ||| || ||||| |||||||| || Sbjct 228085 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 228035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947102027944