Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq22 123 2e-23 seq19 109 5e-19 seq1 93.3 4e-14 >seq22 Length=2936705 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || ||||| |||| ||||| ||||||| | Sbjct 228035 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGAAAGC 228094 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || |||| || || || ||||||||||| || || || || Sbjct 228095 TCCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGAC 228154 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || || || ||||| ||||| ||| | ||||| |||||| | || || ||| Sbjct 228155 CAACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTAC 228214 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || |||| | || | || |||| |||| || ||| Sbjct 228215 AACATCCAGAAGGAGAGCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 228265 >seq19 Length=4558656 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || || || ||||| | || | Sbjct 3388024 ATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAGC 3387965 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || ||||| |||||||||||||| || || || || Sbjct 3387964 GACACTATTGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAG 3387905 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||| | |||||| ||| || | || ||||||||| Sbjct 3387904 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTACAAC 3387845 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || | || |||| |||| || ||| Sbjct 3387844 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGTGGTGGT 3387797 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || ||| |||| || || ||||| | || Sbjct 3387796 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 3387737 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| || || || || || Sbjct 3387736 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3387677 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | ||||| ||| || | ||||| |||||| Sbjct 3387676 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACAAC 3387617 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || |||| ||||||| ||| Sbjct 3387616 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGTCTGCGCGGCGGT 3387569 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| ||||| || || | | Sbjct 3388480 ATGCAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 3388421 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||| ||||||||||| ||||| || || ||| Sbjct 3388420 GATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 3388361 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || || |||||| || ||| |||||| Sbjct 3388360 CAGCGCCTGATTTTCGCAGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTACAAC 3388301 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||| | ||| | || | || | ||||| ||| Sbjct 3388300 ATCCAGAAGGAGAGCACCCTGCATCTCGTCCTCCGTCTCCGCGGTGGT 3388253 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || | || | || || || || | Sbjct 3388252 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCG 3388193 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| || || ||| Sbjct 3388192 GACACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 3388133 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| | ||| |||||| Sbjct 3388132 CAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACAAC 3388073 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || | || ||||| ||||||| || Sbjct 3388072 ATCCAGAAGGAGTCGACGCTCCACCTGGTGTTGCGTCTGCGCGGTGG 3388026 >seq1 Length=6771991 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| | || || || || | || || | ||| || |||| Sbjct 3549266 ACCGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATCGACAATGTCAAGTCC 3549207 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || || || || || ||||| Sbjct 3549206 AAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTGATTTTCGCAGGCAAG 3549147 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| ||||| ||||||| | || || |||||||| ||||| || ||||| | || Sbjct 3549146 CAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAGGAGTCCACTCTGCAC 3549087 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || ||||||| ||| Sbjct 3549086 CTGGTGCTCCGCCTGCGCGGTGGT 3549063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727877229560