Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq19 100 6e-16 seq22 87.8 4e-12 seq20 86.0 1e-11 seq12 86.0 1e-11 >seq19 Length=4558656 Score = 100 bits (110), Expect = 6e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||| || || || |||| ||||||||||| ||| Sbjct 2535216 GGTGAGGACCTGTGCAACTGCACGTTCTCCCTTGCCTACGGTGCCAAGATTCTGCTGAAC 2535157 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | ||||||||| | || || ||||| ||||||||| || | Sbjct 2535156 CAGACCCACCTGCGCCTGAAGCGTGGCCAGCGCTACGGTCTGTGCGGTCCCAACGGTTCC 2535097 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||||||||| |||| ||| | || || || || || ||| Sbjct 2535096 GGCAAGTCCACCCTGATGCGCGCCATCAACAACGAGCAGGTTGAGGGCTTCCCCAA-GCA 2535038 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 2535037 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTGGACTC 2534996 Score = 95.1 bits (104), Expect = 2e-14 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| || || |||||| ||||| | ||| | | || || Sbjct 2533812 CACTCGCGCATGCGCGGTCTGTCCGGTGGCCAGCGTGTCAAGGTCGTCCTTGCCGCCTGC 2533753 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | ||||||| |||| || ||||||||||| |||||||| |||||||| || Sbjct 2533752 TC-GTGGCAGCGCCCTCACCTGATTGTCCTCGACGAGCCCACCAACTACCTGGACCGTGA 2533694 Query 280823 GAGCCTGGGCGCTCTG 280838 ||||| || ||| Sbjct 2533693 CTCTCTGGGTGCCCTG 2533678 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 1514348 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 1514407 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1514408 CCCGCATCGGGC 1514419 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 2451237 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 2451178 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2451177 CCCGCATCGGGC 2451166 >seq22 Length=2936705 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || |||||||| ||||||||||||||||||||||| || | || || || || | Sbjct 2851865 AGTTGGCTCTCTGTCCGGTGGTTGGAAGATGAAGCTGGCGCTGGCGCGTGCTATGCTGCA 2851924 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGAC 279800 | ||||| ||||| || || || ||||| || |||||| ||||| Sbjct 2851925 GAAGGCCGACGTCCTGCTCCTGGACGAGCCGACTAACCACTTGGAC 2851970 >seq20 Length=3586167 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 997030 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 997089 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 997090 CCCGCATCGGGC 997101 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 2977777 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 2977718 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 2977717 CCCGCATCGGGC 2977706 >seq12 Length=5490615 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 1387470 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 1387529 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 1387530 CCCGCATCGGGC 1387541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836483940184