Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq19 96.9 3e-15 seq22 91.5 1e-13 seq1 84.2 2e-11 >seq19 Length=4558656 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||||||||| || ||||| ||||||||| |||||||| || | Sbjct 3387569 ACCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 3387628 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || |||| || | |||||||||||||| |||||||||||||| || ||| Sbjct 3387629 CAGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGG 3387688 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 3387689 GATGCCCTCCTTGTCC 3387704 Score = 93.3 bits (102), Expect = 3e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||||||||| || |||||| ||||||||| ||||||||||| | Sbjct 3387797 ACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAG- 3387855 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || || | || || | |||||||| ||||| |||||||||||||| || || Sbjct 3387856 AAAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCG 3387915 Query 34019 GCACGCTCTCTTTGTCCATAATTTT 34043 | | | ||| |||||| ||| || Sbjct 3387916 GGATACCCTCCTTGTCCTGAATCTT 3387940 >seq22 Length=2936705 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||| ||||| || || |||||||||||||| |||||||| || | Sbjct 228265 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 228206 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || || |||| || | |||||||| ||||| ||||||||||| || || || Sbjct 228205 -AAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCG 228147 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 228146 GGATGCCCTCCTTGTCC 228130 >seq1 Length=6771991 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 || ||| || | ||| || |||||||| || || ||| |||||| || |||||||| || Sbjct 3549060 GATACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTC 3549119 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 | || || |||| ||||| |||||||| || || |||||||||||||| || Sbjct 3549120 CGACAGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGG 3549179 Query 34017 CGGCACGCTCTCTTTGTCC 34035 || | || ||| |||||| Sbjct 3549180 GGGAATGCCCTCCTTGTCC 3549198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062283859248