Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq19 145 2e-29 seq22 113 1e-19 >seq19 Length=4558656 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||| | ||||| || || ||||| || |||||| | Sbjct 3388254 CCACCGCGGAGACGGAGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 3388313 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || |||||||| ||||| |||||||| |||||| Sbjct 3388314 AGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTG---GTCTGGG 3388370 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || | || ||||| || || | ||| ||| || Sbjct 3388371 GGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCG 3388430 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 3388431 ACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 3388480 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || ||||| || | || || || || | ||| || || ||||| || |||||| Sbjct 3387567 TGACCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 3387626 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||||| || ||||| || | || || || || |||||||| ||||| || | Sbjct 3387627 GACAGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGC 3387686 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| || | |||||||| || || | ||| ||| || Sbjct 3387687 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCC 3387746 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || ||||| ||||||||||| || ||||| Sbjct 3387747 ACCTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 100 bits (110), Expect = 7e-16 Identities = 167/236 (71%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | | || || || | ||| || || ||||| || |||| Sbjct 3388022 CATG-CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 3388080 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || || ||||| || || || | || || || ||||| |||||||||||||| | Sbjct 3388081 CGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTG---GT 3388137 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTC 288417 ||||| || || || || |||||||| || ||| || ||||| || || | || Sbjct 3388138 CTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAG 3388196 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || | ||| || ||||| || || || ||||||||||| |||||||| Sbjct 3388197 GACTCGACCTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | |||| || || ||||| || || || | Sbjct 3387798 CCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAA 3387857 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || |||||||| ||||| || | ||| Sbjct 3387858 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387917 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || ||||| || || ||| || || || || |||| ||||| || || Sbjct 3387918 ATACCCTCCTTGTCCTGAATCTT-GCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCAC 3387976 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || ||||| ||||||||||| |||||||| Sbjct 3387977 CTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 >seq22 Length=2936705 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || ||||| | Sbjct 228264 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 228205 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || |||||||| |||||||| | ||| Sbjct 228204 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGG 228145 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||| ||| || Sbjct 228144 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACC 228085 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || || || ||||||||||| |||||||| Sbjct 228084 TCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 228038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654037256272