Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq19 109 5e-19 seq1 98.7 1e-15 >seq19 Length=4558656 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||||| | ||||| || || | |||||| || || || |||||||| || | Sbjct 3387569 ACCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 3387628 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| |||||||||||||||||| | || || ||||||||||| || || Sbjct 3387629 CAGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGG 3387688 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | ||||| Sbjct 3387689 GATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCAC 3387748 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| |||| || || ||||| |||||||| Sbjct 3387749 CTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | ||| || || || || ||||||||||| | Sbjct 3387797 ACCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGA 3387856 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || |||||||||||||| ||| | || || ||||||||||| || || Sbjct 3387857 AAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGG 3387916 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | | ||||| Sbjct 3387917 GATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCAC 3387976 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || |||||||| ||||| Sbjct 3387977 CTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | | ||| || || | |||||| || || || |||||||| || Sbjct 3388026 CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3388085 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | || || ||||||||||| || |||| || ||||| ||||| || ||| Sbjct 3388086 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGA 3388145 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || || || || Sbjct 3388146 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 3388205 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 3388206 TCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || || |||||| ||||||| ||||||||||| || || Sbjct 3388290 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAAA 3388349 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||| ||||| || ||||| || || || || || || || ||| || Sbjct 3388350 ATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 3388409 Query 64373 TCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | |||| ||| || || || || | || | |||||||||||| | || || | Sbjct 3388410 TCGATGGTAT--CCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCA 3388467 Query 64431 CGAAAATTTGCAT 64443 | || || ||||| Sbjct 3388468 CAAAGATCTGCAT 3388480 >seq1 Length=6771991 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| || || | || || || ||||| |||||||| || | Sbjct 3549063 ACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGA 3549122 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || | ||||||||| || |||| || ||||||||||| || || Sbjct 3549123 CAGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGG 3549182 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || || || || Sbjct 3549183 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 3549242 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 || | || | |||||||||||| | || || ||||| Sbjct 3549243 CTCCAAGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 3549281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644650106560