Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq22 140 3e-28 seq19 134 1e-26 seq1 96.9 3e-15 >seq22 Length=2936705 Score = 140 bits (154), Expect = 3e-28 Identities = 344/516 (67%), Gaps = 17/516 (3%) Strand=Plus/Plus Query 47070 CCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACT 47129 ||||| | |||| |||||||| ||||| |||||| || |||| | ||| Sbjct 2568590 CCCTGTATCCGCAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCCGACGAGCAGTCCACC 2568649 Query 47130 CTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTT 47189 | ||| | ||| || | |||||||| ||||||||| |||||||| || ||||| Sbjct 2568650 TTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGT-GCTTT 2568708 Query 47190 G-CGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGA 47248 | | || || | |||| | || | ||||||||||| || || |||||| Sbjct 2568709 CTCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGA 2568768 Query 47249 GCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTC---TACTA-CAACA 47304 ||| |||||| | ||||| || ||||||||| |||||||||| || | || || | Sbjct 2568769 GCTGATCTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACCT 2568828 Query 47305 CTAGAGTCGATCAA--AAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGT 47362 ||| || | | ||| || | | | || ||||| ||| ||| || || Sbjct 2568829 GAAGAACCGCCCCAGCAAGCAGGTCAT--------TGAG-GACATCATTGTCGATGCTGT 2568879 Query 47363 CGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGC 47422 | || ||| |||||| | |||||||||||||| | | |||| |||||||| Sbjct 2568880 CAAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTGTGCCCTGCTGGGCATGAACGC 2568939 Query 47423 GGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTA 47482 |||||| ||||||| || || ||||||||||| ||||| || || | Sbjct 2568940 CACCCTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTGGTCGCTCTCGGCAA 2568999 Query 47483 TCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGG 47542 ||| | |||| | || || || ||||| || ||| | ||||| || || | || Sbjct 2569000 CGAGAAGGTGTACCGCGCCACCAACCCGTTCGACTTCATGGAGAACATCTCCCTGGGCGG 2569059 Query 47543 CAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||||||| |||||||||||||| ||||| || Sbjct 2569060 CAAGACCAACTTCTTCGAGAAGCGCGTTGGCGAGTA 2569095 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| |||| || | || ||| || || || ||||| || Sbjct 228267 GCACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCC 228208 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | |||||| || || ||||| || || || |||||| ||||| || || || Sbjct 228207 GAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGC 228148 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||||||||||||| ||| ||| ||||| | |||| |||||| | || || Sbjct 228147 GGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCC 228088 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | |||||||| || || || || || ||||||||||| Sbjct 228087 ACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 228038 >seq19 Length=4558656 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | |||||||||| || | ||| ||||| || || || ||||| |||| | Sbjct 3388026 CCACCGCGCAGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3388085 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || ||| | |||| ||||| || || || || Sbjct 3388086 AGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGA 3388145 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| |||||||| |||||| Sbjct 3388146 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCGATGGTGTCCGAGGACTCGAC 3388204 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || || || |||||||| Sbjct 3388205 CTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||| ||||| || || || |||||||| Sbjct 3387798 CCACCACGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAA 3387857 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| |||||| |||||||| || || || Sbjct 3387858 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387917 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || || ||||| | || | ||||| | ||||| || Sbjct 3387918 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACC 3387977 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| ||| | || ||||| ||||| || || || |||||||||||| Sbjct 3387978 TCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCATG 3388025 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||| ||||| || | ||| ||||| || || || ||||| ||| | Sbjct 3387570 CCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3387629 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || || || ||||| || || || |||||| |||||||| || || || Sbjct 3387630 AGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387689 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||| | |||| || | |||||| | ||| || Sbjct 3387690 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTG-TCAATGGTGTCGGACGACTCCAC 3387748 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| ||||| ||||| || || || || || ||||| Sbjct 3387749 CTCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | |||||| || || ||||| || || ||| | Sbjct 3388289 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCTGCGAA 3388348 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 |||| ||||| || || || || ||||||||||||||| || || ||||| ||| Sbjct 3388349 AATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 3388408 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| ||| |||| |||||| || | ||| | || |||||||| || || || | Sbjct 3388409 G-TCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCA 3388467 Query 127101 CAAAAATCTGCATGG 127115 |||| |||||||||| Sbjct 3388468 CAAAGATCTGCATGG 3388482 >seq1 Length=6771991 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || ||||| ||||| || ||||| || | Sbjct 3549064 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGAC 3549123 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || | ||| || || ||| | |||| |||||||| || || || Sbjct 3549124 AGGGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 3549183 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | |||| ||||||| |||||| Sbjct 3549184 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 3549243 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || | ||| | || |||||||| || || || || || Sbjct 3549244 TCCAAGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 3549281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500657349760