Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq22 178 1e-39 seq19 167 2e-36 seq1 129 6e-25 >seq22 Length=2936705 Score = 178 bits (196), Expect = 1e-39 Identities = 346/504 (69%), Gaps = 14/504 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || || ||| ||| ||| | Sbjct 2569101 TTCTGGTACTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTC 2569042 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || || ||||||| | | ||| ||| | |||||| || |||| Sbjct 2569041 TCCATGAAGTCGAACGGGTTGGTGGCGCGGTACACCTTCTCGTTGCCGAG-AG--CGACC 2568985 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCC 132777 ||||| | |||||| |||||||| ||||| ||| ||| ||| || || | ||| Sbjct 2568984 AGCAGACGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGGTGGCG---TTCATGCCC 2568928 Query 132778 AGCAGACGCACCGG-CAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836 ||||| |||| || ||| || ||||| || || |||||||| ||| || ||| Sbjct 2568927 AGCAGG-GCACAGGGCAGAGCCTCGGTCAGGAACTCCTGCTCGATCTTGACAGCATCGAC 2568869 Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA 132896 | ||| ||| || | | | ||| || || | | || || ||||| || ||| Sbjct 2568868 AATGATGTCCTCAATGACCTGCTTGCTGGGGCGGTTCTTCAGGTGAGAGAACAGCAGGCA 2568809 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 ||||||||| |||| |||||||| | || || || |||||| ||| |||| ||| Sbjct 2568808 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCC 2568749 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 |||||| |||||||| || || ||||| || |||| || |||| || ||||||| Sbjct 2568748 GGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGAGAAAGCACCGCTGAAGAAGAT 2568689 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 ||||||||||| |||||||| ||||| |||| | | || |||| | | | || ||| Sbjct 2568688 ACCCTCGACGGCAGCGAAAGCAACCAGACGCTGGGCAAAGGTGGACTGCTCGTCGGAGAT 2568629 Query 133077 CCAGCGCAGCGCCCATTCGGCCTT 133100 ||| ||| ||||| |||||||| Sbjct 2568628 CCACTTCAGAGCCCAGTCGGCCTT 2568605 Score = 176 bits (194), Expect = 5e-39 Identities = 205/276 (74%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| ||| || || | || ||||| | ||||||||| ||| || || Sbjct 2568476 GTAGGTGTCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 2568417 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| |||||| || || ||| |||||||| || || Sbjct 2568416 GCCGTAGAAGCAGCGAGCCTCGGGCACCTGGACCTCACCGCTGAAGCGCTCGACGAGGTT 2568357 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| ||||| || ||||||||| || ||||| | |||| || || | ||| Sbjct 2568356 CTCGTTGACAATGCCATCAGAGGCGGCGAAGAACGCCAGAATGTGCGAGACAAAGTAGCG 2568297 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 || | ||||||| || | ||||||| || |||||||||||||| | |||||| Sbjct 2568296 TTCATCCTCGTTCATTCGGTTGTTCCAGTCGTGCAGATCCTTGGACAGGTCGATCTCCTC 2568237 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || |||||||| || |||||||| Sbjct 2568236 GGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 2568201 Score = 134 bits (148), Expect = 1e-26 Identities = 165/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||||||||||||||||||| | || || || | Sbjct 228035 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGAAAGC 228094 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 |||||| | | | | | || || |||| ||||| ||||| || |||||| || Sbjct 228095 TCCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGA 228153 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | |||||||| ||||| || |||| |||||||| ||||| Sbjct 228154 CCAACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTA 228213 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || ||||| |||| ||||| Sbjct 228214 CAACATCCAGAAGGAGAGC-ACCCTGCACCTGGTCCTGCG 228252 >seq19 Length=4558656 Score = 167 bits (184), Expect = 2e-36 Identities = 177/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||| || | || |||||| || | Sbjct 3388252 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATTACGTTGGAGGTCGAGTCCTCG 3388193 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| |||||| | |||| Sbjct 3388192 GACACCATCGACAACG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACC 3388135 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| ||||||||| |||||||| || | |||||||| | |||||||| Sbjct 3388134 AACAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGAGCGACTACA 3388075 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| ||||||| || ||||| ||||| || | || ||| Sbjct 3388074 ACATCCAGAAGGAGTCGACGCTCCACCTGGTGTTGCGTCTGCGCGGTGGC 3388025 Score = 140 bits (154), Expect = 3e-28 Identities = 165/218 (76%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| | | Sbjct 3388480 ATGCAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 3388421 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| |||||| | ||||| Sbjct 3388420 GATACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 3388362 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| ||| ||||| |||||||| |||| |||||||||| ||||||||| Sbjct 3388361 ACAGCGCCTGATTTTCGCAGGCAAGCAGCTGGAAGACGGTCGCACCCTCAGCGACTACAA 3388302 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||| || |||||| | || || ||| Sbjct 3388301 CATCCAGAAGGAGAGC-ACCCTGCATCTCGTCCTCCGT 3388265 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 3387796 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTGGAGGTGGAGTCGTCC 3387737 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || || |||| ||||| ||||| || |||||| |||| Sbjct 3387736 GACACCATTGACAACG-TGAAGTCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 3387679 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| ||||| || |||| || || || |||||||| Sbjct 3387678 AGCAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCCGACTACA 3387619 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||||||| || ||||||||||| || | ||||| Sbjct 3387618 ACATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGTCTGCGCGGCGG 3387570 Score = 105 bits (116), Expect = 7e-18 Identities = 158/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||| ||| |||| || ||| || | Sbjct 3388024 ATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTGGAGAGCAGC 3387965 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| | | || | | |||| || || | ||||| ||||| || |||||| ||| Sbjct 3387964 GACACTATTGACAATG--TCAAGAGCAAGATTCAGGACAAGGAGGGTAT-CCCGCCTGAC 3387908 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | || ||||| ||||| || || | || || || || ||| Sbjct 3387907 CAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCTGATTAC 3387848 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| | |||||||| |||||||||| Sbjct 3387847 AACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCG 3387810 >seq1 Length=6771991 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 3549281 TTCGTGAAGACCCTTACCGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 3549222 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| |||||| | ||||| ||||| || Sbjct 3549221 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 3549162 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| ||| |||| |||| |||||||| |||||||||||||||||| Sbjct 3549161 ATTTTCGCAGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAG 3549102 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || | || ||||| ||||||| || Sbjct 3549101 GAGTCCACTCTGCACCTGGTGCTCCG 3549076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172649948160