Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq22 129 1e-24 seq19 129 1e-24 seq1 118 2e-21 >seq22 Length=2936705 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| || | ||| || | || || ||| Sbjct 228246 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCG 228187 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| || || ||||| || ||||| || Sbjct 228186 AGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 228127 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| || |||||||| |||||||| | || || Sbjct 228126 ATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTTTTG 228067 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 228066 CCCGTGAGGGTCTTGACGAAAATCTGCAT 228038 >seq19 Length=4558656 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| || || | || || || Sbjct 3387588 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCGTCCTCA 3387647 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || || ||||| || ||||| || Sbjct 3387648 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 3387707 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||||||||| || ||||| || ||||| | |||||| Sbjct 3387708 ATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACCTCCAGGGTGATCGTCTTG 3387767 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 3387768 CCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || ||||| || || ||||| || || || ||||| ||| || || | ||||| Sbjct 3388040 CAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATC 3388099 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || |||||||| || ||||| || || || ||||||||||| |||||||| || ||||| Sbjct 3388100 CTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 3388159 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||||||||| || ||||||||||| || || || | |||| || Sbjct 3388160 CTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTAATGGT 3388219 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || | || || ||||| | ||||| Sbjct 3388220 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || ||| ||| || || || ||||| ||| || || | || ||||| Sbjct 3388272 ACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCC 3388331 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| |||||||| || || || ||||||||||| |||||||| || ||||| ||| Sbjct 3388332 AGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 3388391 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||| ||||| || || |||||||| | ||||| Sbjct 3388392 ATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTG 3388451 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 3388452 CCGGTAAGGGTCTTCACAAAGATCTGCAT 3388480 >seq1 Length=6771991 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| ||||| || ||||| || | || || | || || || Sbjct 3549082 ACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 3549141 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| |||||||| || || || || |||||||| |||||||| || ||||| || Sbjct 3549142 AACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 3549201 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || |||||||| || || || | ||| | ||||| Sbjct 3549202 ATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTG 3549261 Query 195112 CCTGTCAAAGTTTTTACGAA 195131 || || | || || ||||| Sbjct 3549262 CCGGTAAGGGTCTTCACGAA 3549281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481258834408