Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq22 109 4e-19 seq19 98.7 6e-16 >seq22 Length=2936705 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| |||||||||||| | || | || || Sbjct 228246 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCG 228187 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || || ||||| |||| | ||||||||||| Sbjct 228186 AGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 228127 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| || | ||||| || | || || || | ||| ||||| Sbjct 228126 ATCTTCGACTTGAC--AT--TGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGT 228071 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| |||||||| ||||| || || |||||||| || Sbjct 228070 TTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 228035 >seq19 Length=4558656 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| || || ||||| | || |||| || Sbjct 3387816 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCA 3387875 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || |||||||| |||| | ||||||||||| | Sbjct 3387876 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGA 3387935 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | || | | ||| || |||| ||| ||||| || Sbjct 3387936 ATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAATGGTCTTG 3387995 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||| || || |||||||| Sbjct 3387996 CCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| ||| | || | || |||||||| || || Sbjct 3388284 GTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTGCTTGCCT 3388343 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || || |||||| | || | ||||||||||| |||||| ||| Sbjct 3388344 GCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 3388403 Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || | | ||||| | ||| | ||| || || | ||| ||||| || || || || Sbjct 3388404 AC----GTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAG 3388459 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 |||||||||||||||||||| Sbjct 3388460 GGTCTTCACAAAGATCTGCAT 3388480 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||| | || |||| |||||||| || || || || Sbjct 3388062 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCGAAA 3388121 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || |||||| | || | ||||||||||| ||||| |||||| Sbjct 3388122 ATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 3388181 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || ||||| || || ||||| ||||| || Sbjct 3388182 TCGATGGTGTCCGAGGACTCGACCTCCAACGTAATGGTCTTGCCAGTGAGGGTCTTGACG 3388241 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 3388242 AAGATCTGCATA 3388253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633505044672