Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq19 104 2e-17 seq22 98.7 8e-16 seq1 86.0 5e-12 >seq19 Length=4558656 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || |||||| ||| || || || ||||||||||| ||| | || Sbjct 3387807 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGG 3387866 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| ||||| ||||| || || | || | |||||| Sbjct 3387867 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCC 3387926 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGC-CTCCACCTCCACCGT 48727 ||||| |||||| || ||| | | || || | || ||||||||| | || Sbjct 3387927 TTGTCCTGAATCTTGCTCTTGACATTGTCAATAGTGTC-GCTGCTCTCCACCTCGAGGGT 3387985 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || ||||||| || || || ||||||||||| Sbjct 3387986 AATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 3388024 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || |||| ||||| || ||||| ||| || || || ||||| || || Sbjct 3387570 CCGCCGCGCAGACGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3387629 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| |||||||| ||||| ||||| || || | || Sbjct 3387630 AGCGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 3387689 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || |||| ||||||| Sbjct 3387690 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACC 3387749 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || ||||| || ||||||| || || || || || ||||| Sbjct 3387750 TCCAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || |||||||| || || || ||||| || || | ||| |||| |||| ||| Sbjct 3388277 ATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCTTCCAGCTG 3388336 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || || || ||||| |||||||| || | ||||| |||||||||||| |||||| Sbjct 3388337 CTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 3388396 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | || |||| ||| ||||| | || || || || || || Sbjct 3388397 GGACTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 3388456 Query 48743 CAAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || ||||| |||||||| ||| Sbjct 3388457 AAGGGTCTTCACAAAGATCTGCATGGTG 3388484 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||| || ||||| ||| || || || ||||| || || | ||| Sbjct 3388035 AGACGCAACACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGA 3388094 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || || || ||||| |||||||| || | ||||| ||||||| Sbjct 3388095 CCATCCTCCAGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCC 3388154 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||| ||||||| |||| Sbjct 3388155 TTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTA 3388214 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 3388215 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 >seq22 Length=2936705 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||| || || |||||||| || || || ||||| || || || | ||| Sbjct 228255 AGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGA 228196 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| ||||| |||||||| || | || | ||||||| Sbjct 228195 CCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCC 228136 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || |||||||| | || Sbjct 228135 TTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTG 228076 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || ||||| ||||| | || || || |||||||||||| || Sbjct 228075 ATGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 228034 >seq1 Length=6771991 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| ||||| || ||||| || || || | || Sbjct 3549073 AGGCGGAGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGG 3549132 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||||||||| || || || ||||| ||||| || || | ||||| ||||||| Sbjct 3549133 CCGTCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCC 3549192 Query 48669 TTGTC 48673 ||||| Sbjct 3549193 TTGTC 3549197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937488575752