Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq18 383 3e-101 seq22 156 8e-33 >seq18 Length=5350014 Score = 383 bits (424), Expect = 3e-101 Identities = 1071/1632 (66%), Gaps = 60/1632 (4%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| | ||||| ||| |||||| | || |||| |||||| || | |||||| || Sbjct 3719550 CATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGCAGCCACGGGTTCACGAC 3719491 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | ||||| | | |||||| | ||| || ||| | || |||| || Sbjct 3719490 CTGGAACTCGCCAGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCA 3719431 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||| ||||| | ||| || || ||||| ||||||| ||||||||| Sbjct 3719430 CTCGTTGTTGCCCAGAATCTGCGACGTCGACGCCGTCGGCATCGGTGCCATCAGCAGACT 3719371 Query 221245 GTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACAGTGTCCTCC 221304 |||||| | ||| ||||| | | ||||| || |||||| || Sbjct 3719370 GTTGCGGATACCGTGCTCCTTGATCTTCAGACGCAGCGCGTCCCAGTCCCA--------- 3719320 Query 221305 CAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGACACCGGACT 221364 |||| | | ||||| || || Sbjct 3719319 CAGGCCCGACGGCGTGACGTCCCACATGTCGAACTGCAGGATGCCCTGCGACACGGGGCT 3719260 Query 221365 CCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGC 221424 || ||||||||| |||||| || | | || ||| || | | ||| ||||||||| Sbjct 3719259 ACCCTCGTACGACGAGTAGGGGCCCTCGATCTCCGCCAGGTCCGACGACGCCGTCAGGGC 3719200 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGA 221483 |||||||||||||||||| |||||| ||||||||| ||| | |||||||| || || Sbjct 3719199 AGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTCGCGCGCCTCGGGCGACTCGA 3719141 Query 221484 AGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543 ||||||| |||||| | |||| |||| ||||| ||||| || |||| ||| ||||| | Sbjct 3719140 AGGGCATGCGCAGCGCCAAAAAGGCGTCTGCCAGACCCTGAACACCGACACCAATGGGAC 3719081 Query 221544 TGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601 ||| | | |||| | ||| || || |||||||| || ||||||||||| || | Sbjct 3719080 GGTGGCGCAAGTTGCTGTTCCGG--GCCTCGGGCACGGGGTAGAAGTTGACGTCAATGA- 3719024 Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACAC 221661 || ||||||| || || ||| |||| ||||| || || | || | Sbjct 3719023 -----TGCGGTTCAGGTTGCGTAC---AACGACCTGGGTCACCTCGTGCAGCTT---CTT 3718975 Query 221662 CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTT 221721 || ||| | | |||| | | || ||||| | ||||| | |||||||| Sbjct 3718974 GAAGTCGTAGACCTCGTTGGTGTAGTCGACAAACGACGGCAGGGCCAGCGACGCCAGGTT 3718915 Query 221722 ACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCA 221781 ||||||||| ||||| || | |||| | |||||||| || |||||| || Sbjct 3718914 ACACACGGCGACCTCATCGGGCGCAGAGTACTCAACAATCTCTGTGCACAGGTTGGAGCT 3718855 Query 221782 CTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAG-CGTCCTTGTAGAGCA 221840 |||||| ||||||| || || || |||||| || |||| ||||||||| |||| Sbjct 3718854 GCGGATGGTGCCCAGGTTCTTTTGGTTGCTCTTGCGGTT-GCAGTGGTCCTTGTACAGCA 3718796 Query 221841 TAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGC 221900 | ||||| ||| ||||| ||| ||| | ||||| | ||| || | ||||| | Sbjct 3718795 TGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCT-TCTGGGCC 3718737 Query 221901 TCACCGTCCTCTTGACTGCA---CCCTCGGTCTTTTCATAC--CCGGTATAGAGCATGTC 221955 | || |||||| || ||||| ||| || ||| | ||| || || || Sbjct 3718736 TTGACG--GTCTTGAGGCCACGGCCCTC---CTTCTCGTACTTCTCGTACAGGGC--CTC 3718684 Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015 ||||| || ||||| || ||||||| || ||| | ||| ||||| || |||| Sbjct 3718683 AAACTCCTCGCCGTAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCA 3718624 Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 | ||| | | ||||| || |||||| |||||||| |||||||| ||| | || || Sbjct 3718623 CTCGCCGTTCTTCTCGACCCGCTTCATGAACAGGTCCGGAATCCACAGGGCCAGGAACAG 3718564 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 || | || ||| ||||||| ||||| ||| || | ||| || | ||||| || | Sbjct 3718563 GTCGCGGGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACAC 3718504 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGA--GCGCCGGGTCGCTTGTTGCCACCC 222193 ||| ||||||||||||| || |||| | |||| || ||||| ||||||||||| ||| Sbjct 3718503 GTCGCCGTGCCACGGCTCGAGGTAGATG--CAGAAGGCACCGGGGCGCTTGTTGCCGCCC 3718446 Query 222194 TGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 || || | ||| | | | |||||| | || || | || | | |||||||| Sbjct 3718445 TGGTCGA-CATAGCGGGCGGTGTTGTTGAACACACGCAGCATGGGAATGATGCCGTTGGA 3718387 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-CAGACAT 222309 ||||| ||||| |||||| | || ||| | || | | ||| | || Sbjct 3718386 CGTGCCGTTAGTGCCGGCAATGTAGGAGCCCGTGGCGC---GGATGCGGTGGACGTTCAG 3718330 Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 ||| ||||||||||| || |||||||||||||| ||||||| ||||| |||||| Sbjct 3718329 GCCAATACCACCGGCCGTCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCC 3718270 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429 ||| || ||| ||||||| || | || ||||| || |||| ||| | | | || Sbjct 3718269 CTCAATGCTGTCGTCCTTGATGTCGACGAGGAAACACGAGGACAGCTGGGCCTGCGGGGT 3718210 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTA 222489 | |||||| || ||||| || ||| || || ||| | | ||||| | ||| Sbjct 3718209 GCCGGCGTTGAAAAGCGTCGGCGAGGCATGCGTGAAGAACTTGTTGGACATGTAGTTGTA 3718150 Query 222490 CGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACA 222548 ||||| | ||| | | |||||||| ||| || | | | | || | |||| || Sbjct 3718149 GGTCTCAATGACACGCTCAATGTTGTCGCCCCAGATGCCGACAGCCACA-CGCATGATCA 3718091 Query 222549 TGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAG 222606 ||| ||| || | ||| ||| || | ||||| |||||| || || || || Sbjct 3718090 TGTGCTGAGGGCGCTCGACAATTTTGCCGTCGAGCT--TGAGCAGATAGGAGCGCTCGAG 3718033 Query 222607 AGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAG 222666 |||||||| |||||||| | | || ||||| | | ||| || | ||| | ||| | Sbjct 3718032 GGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTCAAA 3717973 Query 222667 CTCCGACTTGTG 222678 ||| |||||| Sbjct 3717972 GTCCTCCTTGTG 3717961 >seq22 Length=2936705 Score = 156 bits (172), Expect = 8e-33 Identities = 326/492 (66%), Gaps = 11/492 (2%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| ||||||||||| | | || | || |||| | |||| ||||| || || Sbjct 2568614 TGGGCTCTGAAGTGGATCTCCGACGAGCAGTCCACCTTTGCCCAGCGTCTGGTTGCTTTC 2568673 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||||| || ||||| ||||| ||||||||| | || | ||||||||||||| ||| || Sbjct 2568674 GCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCTTTCTCCTCCATCTTCTGGCTGAAGAAG 2568733 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || |||||||| ||| ||| ||||||||||| ||| | ||||||||||| Sbjct 2568734 CGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAGGGTCTG 2568793 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC---TCAA 26070 |||| || |||||||||||||| | | | ||| || | |||| | ||| Sbjct 2568794 CACACCGACTTTGCCTGCCTGCTGTTCTC---TCACCTG----AAGAACCGCCCCAGCAA 2568846 Query 26071 G-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNN 26129 | || | | | ||||| || ||||| |||||||| ||||||| | Sbjct 2568847 GCAGGTCATTGAGGACATCATTGTCGATGCTGTCAAGATCGAGCAGGAGTTCCTGACCGA 2568906 Query 26130 NNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTA 26189 ||||||||||| || || |||| || |||||||||| Sbjct 2568907 GGCTCTGCCCTGTGCCCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTACATTGAGTT 2568966 Query 26190 TGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCC 26249 || ||||||| ||||||| | || || || | | ||| | | | ||||| Sbjct 2568967 CGTCGCCGACCGTCTGCTGGTCGCTCTCGGCAACGAGAAGGTGTACCGCGCCACCAACCC 2569026 Query 26250 GTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGT 26309 ||||||||| ||||| ||||| || ||| || |||||||||||||| || ||| | || Sbjct 2569027 GTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGT 2569086 Query 26310 CGGCGACTATCA 26321 ||||| || || Sbjct 2569087 TGGCGAGTACCA 2569098 Score = 100 bits (110), Expect = 5e-16 Identities = 165/236 (70%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||||||||| ||||| || ||| Sbjct 2568192 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGATCGACCTG 2568251 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTTTCTCAAG 25593 ||||||| || ||| |||| || | | || || || | | | ||| || | Sbjct 2568252 TCCAAGGATCTGCACGACTGGAACAACCGAATGAACGAGGATGAACGCTACTTTGTCTCG 2568311 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | |||| ||||| || ||||||||||| || || |||||||| || |||| | Sbjct 2568312 CACATTCTGGCGTTCTTCGCCGCCTCTGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 2568371 Query 25654 TTCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || ||| ||| ||||| || |||||||| |||||||| Sbjct 2568372 TTCAGCGGTGAGGTCCAG---GTGCCCGAGGCTCGCTGCTTCTACGGCTTCCAGAT 2568424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844521346560