Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq20 93.3 1e-13 >seq1 Length=6771991 Score = 132 bits (146), Expect = 1e-25 Identities = 209/297 (70%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||||| ||||| | ||||||||| || ||||| ||| | || || ||||| Sbjct 1103279 GTCTTCCAGGGCCTTGACAAGACGACGCTGGATGTAACCCGTTTCGGCAGTCTTGACAGC 1103220 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689 || ||||| ||||| |||||||| |||| || |||||||| | ||| ||| ||| | Sbjct 1103219 CGTGTCAATCAGACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGACGG-CGTCA 1103161 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749 | || | | | | ||| | |||||||| ||||| ||||||||||| | |||| ||||| Sbjct 1103160 GACCACGCAGATAAGAGTTTTCAACGAAGCCACGGGCCTCGGGCGAGTAGTCGTCCTTGG 1103101 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | || || ||||| || | || || ||||| | || || || || || || ||| Sbjct 1103100 TGAAATGGGGCAGTGTGCGGTACTTGAAGCCGAAAGGAATGCGGCGACCCTCGACAATCT 1103041 Query 302810 GCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 |||| || | | | ||||||||||||| || | ||||||||||||| Sbjct 1103040 GCTGGCCGACCAAAGCCGTCATCTGCGAAATGTTGATGGACGAACCCTTGGAGCCAG 1102984 >seq20 Length=3586167 Score = 93.3 bits (102), Expect = 1e-13 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct 1358880 GCACCGTGCGCAATCATACAATCACGCTCCATTTCACCGAACCGCAGACCGCCGTCGCGC 1358821 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570 || | |||||| | ||||| || || Sbjct 1358820 GCACGACCCTCCACCGGCTGCCGCGT 1358795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817147416088