Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq22 138 7e-28 seq19 136 3e-27 seq1 116 2e-21 >seq22 Length=2936705 Score = 138 bits (152), Expect = 7e-28 Identities = 162/217 (75%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||||||| | ||||||||||||||| ||||| |||||||| ||| |||| | || Sbjct 228250 CAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTC 228191 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || |||||||| || || ||||| |||| | ||||||||||| Sbjct 228190 CTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTC 228131 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| || | ||||| || | || || |||| ||| | Sbjct 228130 CTGGATCTTCGACTTGAC--AT--TGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGA 228075 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || |||||||||||||| || || |||||||| Sbjct 228074 TGGTTTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 228038 >seq19 Length=4558656 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||||||||||||||| ||||| ||||| ||| |||| | || Sbjct 3388269 AGGACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCT 3388328 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || ||||| ||||| || || |||||| | || | ||||||||||| Sbjct 3388329 TCCAGCTGCTTGCCTGCGAAAATCAGGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 3388388 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| |||| ||| |||||| Sbjct 3388389 TGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACCTCAAGGGTGATGGTC 3388448 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| ||||||||||||||| Sbjct 3388449 TTGCCGGTAAGGGTCTTCACAAAGATCTGCATG 3388481 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||||||| | || ||||||||| ||||| ||||| ||| |||| |||| ||| Sbjct 3388044 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCC 3388103 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| ||||| || || |||||| | || | ||||||||||| | Sbjct 3388104 AGCTGCTTGCCCGCGAAAATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 3388163 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | || || |||||| || | || |||||||| Sbjct 3388164 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTAATGGTCTTG 3388223 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||||||||| || ||||||||||| Sbjct 3388224 CCAGTGAGGGTCTTGACGAAGATCTGCAT 3388252 Score = 116 bits (128), Expect = 2e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | ||| ||||||||| ||||| || || || || | || |||| Sbjct 3387812 CAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATC 3387871 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || |||||||| || |||||||| |||| | ||||||||||| Sbjct 3387872 CTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTC 3387931 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | || | || || ||| || || | ||| ||||| Sbjct 3387932 CTGAATCTTGCTCTTGACATTGTCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAATGGT 3387991 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| ||||| |||||||| || || ||||||||| Sbjct 3387992 CTTGCCCGTCAGGGTCTTGACGAAAATCTGCATG 3388025 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || || | || | || Sbjct 3387584 CAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGGCCGTC 3387643 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || |||||||| |||| | ||||||||||| Sbjct 3387644 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 3387703 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | || | || | ||| || || | ||| || || Sbjct 3387704 CTGGATCTTGGACTTCACGTTGTCAATGGTGTCGGACGACTCCACCTCCAGGGTGATCGT 3387763 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| |||||||| || ||||| ||||| Sbjct 3387764 CTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3387796 >seq1 Length=6771991 Score = 116 bits (128), Expect = 2e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| |||||| || ||||| |||||||| ||| |||| | || Sbjct 3549079 AGCACCAGGTGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 3549138 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || ||||| ||||| || ||||||||| | || | ||||||||||| Sbjct 3549139 TCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 3549198 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || || |||||| || | ||| |||||| Sbjct 3549199 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 3549258 Query 34946 TTTCCCGTGAGGGTCTTTACAAAG 34969 || || || |||||||| || ||| Sbjct 3549259 TTGCCGGTAAGGGTCTTCACGAAG 3549282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692704734856