Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20globosa_20[genbank_20GCA_5F001630435.1_202016-04-25] 24 sequences; 33,473,551 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq18 158 1e-33 >seq18 Length=5350014 Score = 158 bits (174), Expect = 1e-33 Identities = 281/403 (70%), Gaps = 14/403 (3%) Strand=Plus/Minus Query 147105 CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 ||||||||||||| | |||||||| ||||||||| |||| ||||||||| || Sbjct 544045 CACGTAAAACTGGGCAAACATGTGGCAGGGCGGCAGCACCATCTGCGGCAGGTCCCGCGG 543986 Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC-TTAATCTCTTCGATAA 147223 |||||||||||| | | | |||| | || || | || || | || | || Sbjct 543985 GTTCCAGGCCGACAGGAGAATGCGCCGG-TCAAACGGCGCGTCCTTGAGCT-TGCGCA-- 543930 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTT--TGTCCCGCAGTCCACGT 147277 ||||||| |||||||| |||||||||||| | |||| ||| | | |||| || Sbjct 543929 -CCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGCATAGTCGGTGTGCGG--GTCCTTGT 543873 Query 147278 ACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC 147337 || ||| |||||||| | ||||||||||||||| || || |||| ||||||| || | Sbjct 543872 ACGCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACCGGGCCCAAGTCGCCGTCCTCCC 543813 Query 147338 TGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCA 147397 || || ||||||| | | | || ||| || | || |||| | |||||||||| | Sbjct 543812 GGTCCGTGAAGCCCATCTGGTCCAGGAACGCGCGCGATCCGTTGCCGTCCCAGATCTTGA 543753 Query 147398 CTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCT 147457 | ||||| |||| ||| | | || ||| ||| || | |||||| |||||||||| Sbjct 543752 CGCCCTTCGCGGCCAGCGTCGTCGACGTCGTCTCGCCGCGCACGAACCACAGCAGCTCCT 543693 Query 147458 CCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | | || | | | |||||| | |||||| || || || || Sbjct 543692 CGATGACAGCGCGCGTAAAGACACGCTTGGTTGTGAGGAGCGG 543650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||| | ||| | ||||||| ||||| | ||||||| | | || | || ||| Sbjct 544365 ATCGTCAGCGTTGGGAAGGCCCGGGGCACGCGCTCCAGCTGCGTCTCCAAAGCGTCGACG 544306 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG---CACAAAGTCCCCCGGCTTAAGG 146988 |||| || |||||||||||| || |||| | ||| || || || ||| ||| Sbjct 544305 TGGTCGACGTAGACGTGCGCATCGCCCATGACGTGGGTCAGCGAG---CCGGGCACGAGG 544249 Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048 || ||| | |||| ||||| ||| || || | ||| ||| ||||||||||| || Sbjct 544248 TCGCAGACGCGCGCCAGCATGTGGGTCAGGAGGGCGTACGAGGCGATGTTGAAGGGCACG 544189 Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || ||||||||||| | || | |||||| |||||||| Sbjct 544188 CCGAGGCCCATGTCGCAGGAGCGCTGGTAGAGCTGGCA 544151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487824953600